Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3958 |
Symbol | |
ID | 4040816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 518096 |
End bp | 518800 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637979382 |
Product | cytochrome c oxidase subunit III |
Protein accession | YP_586095 |
Protein GI | 94312886 |
COG category | [C] Energy production and conversion |
COG ID | [COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.178096 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATTCGC AAGTTCCTTC TTCGGCAGGA TCGCATCCGG AAGCCTGGAA TCCGCCGGGC GGCTTCAGGG GCCTCGTCGC TGACTGGTCA TCCGACCAGC GCGCATTCAA GGTGTCCTGG GGCAAGGCGA TGATGTGGAT CTTCCTGCTT TCCGACACCT TCATCTTCAG TTGCTTCCTG ATCGGCTATA TGACTGTGCG CATCTCCACC ACGGTGCCAT GGCCGGATAC CAGCAAGGCT TTCGCCGAGA ACATCGGCGG TCATACGCTA CCGCTGATCC TGATCGCAAT CATGACCTTC GTGCTGATCA CCAGCAGTGG CACGATGGCG ATGGCCGTGA ATTTCGCCTA CCGTCGCGAG CGGCGCCCCT GCGGCCTGCT GATGCTGGCG ACCGCCGCGC TCGGGGCAAC GTTCGTCGGT CTGCAGGCGT TCGAATGGAC CACACTGATC GTGCACGAGG GTGTGCGGCC CTGGGGCAAT CCAATGGGCG CCGCGCAGTT CGGCTCCACG TTCTTCATGA TCACCGGCTT CCACGGCTTT CACGTGACCT GCGGCGTGAT CTACCTGCTG ACGATCGCCA GCAAGGTCGT GCGCGGGCAC TACGAACCAG GCGGCAACTA CCAGGTCGTG GAGATCGCCG GCCTCTACTG GCACTTCGTC GATCTGGTCT GGGTCTTCAT CTTCGCGCTG TTCTATCTCT GGTGA
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Protein sequence | MHSQVPSSAG SHPEAWNPPG GFRGLVADWS SDQRAFKVSW GKAMMWIFLL SDTFIFSCFL IGYMTVRIST TVPWPDTSKA FAENIGGHTL PLILIAIMTF VLITSSGTMA MAVNFAYRRE RRPCGLLMLA TAALGATFVG LQAFEWTTLI VHEGVRPWGN PMGAAQFGST FFMITGFHGF HVTCGVIYLL TIASKVVRGH YEPGGNYQVV EIAGLYWHFV DLVWVFIFAL FYLW
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