Gene Rmet_3958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3958 
Symbol 
ID4040816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp518096 
End bp518800 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content61% 
IMG OID637979382 
Productcytochrome c oxidase subunit III 
Protein accessionYP_586095 
Protein GI94312886 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.178096 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTCGC AAGTTCCTTC TTCGGCAGGA TCGCATCCGG AAGCCTGGAA TCCGCCGGGC 
GGCTTCAGGG GCCTCGTCGC TGACTGGTCA TCCGACCAGC GCGCATTCAA GGTGTCCTGG
GGCAAGGCGA TGATGTGGAT CTTCCTGCTT TCCGACACCT TCATCTTCAG TTGCTTCCTG
ATCGGCTATA TGACTGTGCG CATCTCCACC ACGGTGCCAT GGCCGGATAC CAGCAAGGCT
TTCGCCGAGA ACATCGGCGG TCATACGCTA CCGCTGATCC TGATCGCAAT CATGACCTTC
GTGCTGATCA CCAGCAGTGG CACGATGGCG ATGGCCGTGA ATTTCGCCTA CCGTCGCGAG
CGGCGCCCCT GCGGCCTGCT GATGCTGGCG ACCGCCGCGC TCGGGGCAAC GTTCGTCGGT
CTGCAGGCGT TCGAATGGAC CACACTGATC GTGCACGAGG GTGTGCGGCC CTGGGGCAAT
CCAATGGGCG CCGCGCAGTT CGGCTCCACG TTCTTCATGA TCACCGGCTT CCACGGCTTT
CACGTGACCT GCGGCGTGAT CTACCTGCTG ACGATCGCCA GCAAGGTCGT GCGCGGGCAC
TACGAACCAG GCGGCAACTA CCAGGTCGTG GAGATCGCCG GCCTCTACTG GCACTTCGTC
GATCTGGTCT GGGTCTTCAT CTTCGCGCTG TTCTATCTCT GGTGA
 
Protein sequence
MHSQVPSSAG SHPEAWNPPG GFRGLVADWS SDQRAFKVSW GKAMMWIFLL SDTFIFSCFL 
IGYMTVRIST TVPWPDTSKA FAENIGGHTL PLILIAIMTF VLITSSGTMA MAVNFAYRRE
RRPCGLLMLA TAALGATFVG LQAFEWTTLI VHEGVRPWGN PMGAAQFGST FFMITGFHGF
HVTCGVIYLL TIASKVVRGH YEPGGNYQVV EIAGLYWHFV DLVWVFIFAL FYLW