Gene Rmet_3957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3957 
Symbol 
ID4040815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp517415 
End bp518083 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content67% 
IMG OID637979381 
Productcytochrome c oxidase subunit III 
Protein accessionYP_586094 
Protein GI94312885 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.179765 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCG AATCGTTCGC GGTGGATACG GGTGGCGGCG TCTTCCGGGC TTCGCGTGAA 
GCACCCGGAG GCAGCCCCGC CGGTGGCGAC GCCTTGCATG GACATGGGGC CCGCACCCCC
GGCAGCTTAG GGTTGTGGGT ATTCATGGGC GTAGTCACGG CGCTGTTCAC CTTGTTTCTG
GCCGCCTACA TCATGCGCAT GGACAGTCCG GACTGGCAGC GCATTGCGCT GCCGTGGCAG
GTCTGGCTGT CCACGGCCGT GCTCGCCGCC GCGTGTGTGG CGATGGAGAT CGCCAGGCGG
GCGGCGCACT CGGGCCGCAT GGTGAGAGCA CGTCATGCGT TTCGCCTTGG GGGGATGGGC
GCCGTGGCGT TCGTTGGCGT GCAGTTGTGG GCGTGGCAGG CGCTGTACGC GCTTCACGTC
GTCCCAGCGA ACAATCCAGC GGGCAGCTTC TTCTACTTGC TCACGGCCAT GCACGGTCTG
CACATGCTTG GCGGGCTGGT GGCCTTCGCG TTTGTGGCGG TGGATCGCGG TAGTGGCACG
CGCACGGTGA CGCGCATCGG GCTGTGCGCG CGCTATTGGC ACTTCCTGTT GGCGGTATGG
GTCGTGTTGC TCGGCGCGCT GGGCTGGCTC ACGCCGGAGC TCGTCGCGTA CATCTGTGGC
AGGTCTTGA
 
Protein sequence
MKAESFAVDT GGGVFRASRE APGGSPAGGD ALHGHGARTP GSLGLWVFMG VVTALFTLFL 
AAYIMRMDSP DWQRIALPWQ VWLSTAVLAA ACVAMEIARR AAHSGRMVRA RHAFRLGGMG
AVAFVGVQLW AWQALYALHV VPANNPAGSF FYLLTAMHGL HMLGGLVAFA FVAVDRGSGT
RTVTRIGLCA RYWHFLLAVW VVLLGALGWL TPELVAYICG RS