Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3957 |
Symbol | |
ID | 4040815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 517415 |
End bp | 518083 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637979381 |
Product | cytochrome c oxidase subunit III |
Protein accession | YP_586094 |
Protein GI | 94312885 |
COG category | [C] Energy production and conversion |
COG ID | [COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.179765 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCCG AATCGTTCGC GGTGGATACG GGTGGCGGCG TCTTCCGGGC TTCGCGTGAA GCACCCGGAG GCAGCCCCGC CGGTGGCGAC GCCTTGCATG GACATGGGGC CCGCACCCCC GGCAGCTTAG GGTTGTGGGT ATTCATGGGC GTAGTCACGG CGCTGTTCAC CTTGTTTCTG GCCGCCTACA TCATGCGCAT GGACAGTCCG GACTGGCAGC GCATTGCGCT GCCGTGGCAG GTCTGGCTGT CCACGGCCGT GCTCGCCGCC GCGTGTGTGG CGATGGAGAT CGCCAGGCGG GCGGCGCACT CGGGCCGCAT GGTGAGAGCA CGTCATGCGT TTCGCCTTGG GGGGATGGGC GCCGTGGCGT TCGTTGGCGT GCAGTTGTGG GCGTGGCAGG CGCTGTACGC GCTTCACGTC GTCCCAGCGA ACAATCCAGC GGGCAGCTTC TTCTACTTGC TCACGGCCAT GCACGGTCTG CACATGCTTG GCGGGCTGGT GGCCTTCGCG TTTGTGGCGG TGGATCGCGG TAGTGGCACG CGCACGGTGA CGCGCATCGG GCTGTGCGCG CGCTATTGGC ACTTCCTGTT GGCGGTATGG GTCGTGTTGC TCGGCGCGCT GGGCTGGCTC ACGCCGGAGC TCGTCGCGTA CATCTGTGGC AGGTCTTGA
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Protein sequence | MKAESFAVDT GGGVFRASRE APGGSPAGGD ALHGHGARTP GSLGLWVFMG VVTALFTLFL AAYIMRMDSP DWQRIALPWQ VWLSTAVLAA ACVAMEIARR AAHSGRMVRA RHAFRLGGMG AVAFVGVQLW AWQALYALHV VPANNPAGSF FYLLTAMHGL HMLGGLVAFA FVAVDRGSGT RTVTRIGLCA RYWHFLLAVW VVLLGALGWL TPELVAYICG RS
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