| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3925 |
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| Symbol | |
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| ID | 4040783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 483508 |
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| End bp | 485007 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637979349 |
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| Product | multidrug efflux system protein |
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| Protein accession | YP_586062 |
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| Protein GI | 94312853 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000000707781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAGA CGCTACTTTG CCTGGCCGCC GTGGCGGCGC TTAGCGGCTG CAGCCTGATT
CCCAACTACC AGCGGCCCGC CGCGCCGGTC GATGCGACGT TCCCACAGGG TGAGGCCTAT
CCGAAGACGG CTGCGGTCGA TGCGTCGGTG ACGGCCGTCG ACCTTGGCTG GCGCGACTAC
TTCACCGATC CGCGCTTGCG CGAGCTGATC CAGGTCTCGC TCGACAACAA CCGCGATCTG
CGCGTGGCCG TGTTGAACGT GGAGGCTTAT CGCGCGCAGT ACCGTATCCA GCGTGCCGAC
CTGTTTCCAC AGGTCGACGC CGCGGCGCAG GGCACGCGGC AGCGCGTGCC GGCGGATCTG
TCGGCCACCG GTCAACGTGT GATCAGCAGC CAGTACGGCG TGTCGCTGGG AACCACGGCT
TGGGAACTCG ACCTGTTTGG CCGGTTGCGC AGCCTTAGCG AGGCCGCGTT CGAGCAGTAC
CTCGCGGGTG ACGAGGCGCG CCGCAGCACA CAGATCGCAT TGGTGGCCAG CGTTGCCAAT
GCCTACCTGA CGCTGCGCGC GGACGAGGAG CAACTCAAAG TCACGCGCGA CACGCTGACT
ACGTACGAAC GAACGTACAA CCTTACGCGC CGCCGTTTCG AGGAAGGCAT CGCCTCGCGG
CTGGAGTTGC GCCAGTCGGA AACGCAGGTT GAAACCGCGC GGGCTTCGCT GGCGGCATAC
ACGCGCGCGC TGGCGCAGGA CACCAATGCG CTGACGCTGT TGGTGGGTTC GGGCATGCCG
GCGGATCTGC CGCAAGGGTT GGGGCTGGAA GAGAAGCTCG TGGCCGAGGT GCCGGTGGGG
CTGCCGTCCG ATCTGCTGCA GAATCGTCCG GACATCCTTT CGGCCGAGCA TCGGCTCAAG
GCGGCCAACG CGGACATCGG TGCGGCGCGT GCGGCGTTTT TCCCGCGCAT CACGCTGACG
GCGTCGGCCG GCACGGCCAG CAGGCAGTTG TCGGACCTGT TCGCGGCCGG TCAGGGCACG
TGGCTGTTCT CGCCGCAGAT CGTGCTGCCG ATCTTTACGG CAGGCAGTCT GCAGGCAAGC
CTCGACTACG CAAAGATCCA GAAGGACATC AACGTCGCGG CATACGAGCG GACGATCCAG
GGCGCCTTCC GCGAGGTGGC CGATGGACTG GCCGCACGCG GCACGTTCTC GGATCAGGTT
CAGGCACAGG TGCGGCTCGT CCGGGCAAGT CAGGACTACT TCACGCTGGC TGAACATCGG
TACAGTACTG GTGTGGATAG CTACCTGACA TTGCTTGATG CGCAACGTCA GCTCTACAAC
GCGCAACAGA CGCTGATCAC CGATCGCCTC AACCAGCTCA CCAGCGAGGT GAACCTGTAC
AAGGCGCTTG GCGGTGGCTG GACCGATGTC ACGCACAGGC CGGAGAATGG CGCGCCAGCT
GATGGGGCCG GAAGTTCGAC GACCGGCAGC ACGGGCGGCG GCGCAGGGTC GGCTTCGTAG
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| Protein sequence | MRKTLLCLAA VAALSGCSLI PNYQRPAAPV DATFPQGEAY PKTAAVDASV TAVDLGWRDY
FTDPRLRELI QVSLDNNRDL RVAVLNVEAY RAQYRIQRAD LFPQVDAAAQ GTRQRVPADL
SATGQRVISS QYGVSLGTTA WELDLFGRLR SLSEAAFEQY LAGDEARRST QIALVASVAN
AYLTLRADEE QLKVTRDTLT TYERTYNLTR RRFEEGIASR LELRQSETQV ETARASLAAY
TRALAQDTNA LTLLVGSGMP ADLPQGLGLE EKLVAEVPVG LPSDLLQNRP DILSAEHRLK
AANADIGAAR AAFFPRITLT ASAGTASRQL SDLFAAGQGT WLFSPQIVLP IFTAGSLQAS
LDYAKIQKDI NVAAYERTIQ GAFREVADGL AARGTFSDQV QAQVRLVRAS QDYFTLAEHR
YSTGVDSYLT LLDAQRQLYN AQQTLITDRL NQLTSEVNLY KALGGGWTDV THRPENGAPA
DGAGSSTTGS TGGGAGSAS
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