Gene Rmet_3895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3895 
Symbol 
ID4040748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp439315 
End bp440064 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content66% 
IMG OID637979314 
Productputative transcriptional regulator 
Protein accessionYP_586032 
Protein GI94312823 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.221719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.3606 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGACG CCAACGATCT CCTCTCTCGC AGCCGCGAAC CCGTCTATCT ACAGCTGGCC 
ACGATCTTTC GACGACAGAT CGAAAGCGGC GCATGGCGGC CGGGTGAACA GATTCCTTCC
CTCGAAGCGC TCTGCCGTCA GTACGGCGTG GCGCGCATGA CCATGCACAA CGCCCTTTCC
CGTCTGGACG AGGAAGGGCT GGTCGAGCGC TCGCGCGGCC GGGGGACGTT CGTCAAGGCG
GGCGGCCGTG AATGCCGGCG AATGGCGTTG CCGATCAACT GGAACCAGGC CGTGGCCGTC
GGCGACAAGC TGTCCACGGA GGCCATCGTC GAATCCACCG CCGATGTGCC GCTGCCTGAT
GACCTGGGCA TGCCCTGCGA CGGCCGTCGC GCCGATGCCT ACCATTTCCT GCACCGCGCT
CATCGCACCG ATGGAAGACC GTTTGCCGTG GGCGAGGTCT ATATCGCAGC CGATGTCTTC
GCGCGCGACC CCGAGGCTTT CCGCCACGGC GCGTCGGTGC CGGTGCTCGA CCGATTTCCC
GGCCTCAAGG TCAATGCTGC GCGGCAGCGG CTATCGATCG TTCCGGCCGG TGCCGAATCC
GCCAGCGCGC TCGAACTGGC CGTGGGCGCC CCCGTGGCTG AACTGCGGCG TTTTGCCTGC
GTCGACGACG TGATCGTCTA TTACGCACGG ATCGAGTTCC CGACCGAGTA TGTCTGCCTG
GATTTCGATC TGCTCGCCCC CCATTCCTGA
 
Protein sequence
MPDANDLLSR SREPVYLQLA TIFRRQIESG AWRPGEQIPS LEALCRQYGV ARMTMHNALS 
RLDEEGLVER SRGRGTFVKA GGRECRRMAL PINWNQAVAV GDKLSTEAIV ESTADVPLPD
DLGMPCDGRR ADAYHFLHRA HRTDGRPFAV GEVYIAADVF ARDPEAFRHG ASVPVLDRFP
GLKVNAARQR LSIVPAGAES ASALELAVGA PVAELRRFAC VDDVIVYYAR IEFPTEYVCL
DFDLLAPHS