Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3895 |
Symbol | |
ID | 4040748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 439315 |
End bp | 440064 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637979314 |
Product | putative transcriptional regulator |
Protein accession | YP_586032 |
Protein GI | 94312823 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.221719 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.3606 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGACG CCAACGATCT CCTCTCTCGC AGCCGCGAAC CCGTCTATCT ACAGCTGGCC ACGATCTTTC GACGACAGAT CGAAAGCGGC GCATGGCGGC CGGGTGAACA GATTCCTTCC CTCGAAGCGC TCTGCCGTCA GTACGGCGTG GCGCGCATGA CCATGCACAA CGCCCTTTCC CGTCTGGACG AGGAAGGGCT GGTCGAGCGC TCGCGCGGCC GGGGGACGTT CGTCAAGGCG GGCGGCCGTG AATGCCGGCG AATGGCGTTG CCGATCAACT GGAACCAGGC CGTGGCCGTC GGCGACAAGC TGTCCACGGA GGCCATCGTC GAATCCACCG CCGATGTGCC GCTGCCTGAT GACCTGGGCA TGCCCTGCGA CGGCCGTCGC GCCGATGCCT ACCATTTCCT GCACCGCGCT CATCGCACCG ATGGAAGACC GTTTGCCGTG GGCGAGGTCT ATATCGCAGC CGATGTCTTC GCGCGCGACC CCGAGGCTTT CCGCCACGGC GCGTCGGTGC CGGTGCTCGA CCGATTTCCC GGCCTCAAGG TCAATGCTGC GCGGCAGCGG CTATCGATCG TTCCGGCCGG TGCCGAATCC GCCAGCGCGC TCGAACTGGC CGTGGGCGCC CCCGTGGCTG AACTGCGGCG TTTTGCCTGC GTCGACGACG TGATCGTCTA TTACGCACGG ATCGAGTTCC CGACCGAGTA TGTCTGCCTG GATTTCGATC TGCTCGCCCC CCATTCCTGA
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Protein sequence | MPDANDLLSR SREPVYLQLA TIFRRQIESG AWRPGEQIPS LEALCRQYGV ARMTMHNALS RLDEEGLVER SRGRGTFVKA GGRECRRMAL PINWNQAVAV GDKLSTEAIV ESTADVPLPD DLGMPCDGRR ADAYHFLHRA HRTDGRPFAV GEVYIAADVF ARDPEAFRHG ASVPVLDRFP GLKVNAARQR LSIVPAGAES ASALELAVGA PVAELRRFAC VDDVIVYYAR IEFPTEYVCL DFDLLAPHS
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