| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3861 |
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| Symbol | |
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| ID | 4040555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 403659 |
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| End bp | 405323 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637979280 |
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| Product | putative intramembrane serine protease |
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| Protein accession | YP_585998 |
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| Protein GI | 94312789 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCAAT CGCAACGCTG GCGGCAAAGG GCCACCCCTG CCCGCCCGAT AGGCGCCTTC
TACGTGCGCC AGTTTGGCGC CGCGCTGTTC ATGCGGCTGA TCTTGTGGGC GATCTTTGGT
GGCCTGGCTG CGCTGCTGCT GGTCAGCATG CGCGGCAACG CCGGCTCCGT TTTGATGAGC
CTAGTGCTGC TAGGCATCCT GATCCTCTTT GAATGGGGAT GGGGACGCCA TGCGCCGCTC
GGCAAACCAT TGCTGACCAT CGATGCCAGC GGCATCGGTT CCACGGCATT CCCGCGCAAA
CGCCGCCATC TGCGCTGGCG AGACATCGCT GGTGCGGCGA TACGCGACGT GCGGGGCGCC
GGCGAGACCC TTGTCATCGA AACGGTCGAA ACGAAGCCCG GCGGCCGTCG GAAAGCGCGT
CGCGCCTATC AGGTACGACT GGCCATGCTG CGCAAGTCCG ATCAGCAACT CGTTCAGGCA
CTGGTGGCGC ACCACATGCG CGTGGCTGGC ATCACGCCGT CCGCCGACGT TGTTGCCGAG
CGGGCCTTCG TGGCGCAAAT GCAGGCGCTG CCCCGCACCT GGGGCCTGTA CAGCATGATC
GCCGTGAACG TGCTCATCTG GCTCATCATG CTTTCGCGCG GCGCCGCGCT GGATGGCGCC
GCGCCAAAGA TGCTCATTGA CTGGGGCGGC AATCTTGGCG CGCTGACGCA GGACGGTCAG
TGGTGGCGGC TGCTGACGGC CACCTTCCTT CACGGCAGCC TCAAGCATCT GGCCGCCAAT
ATGGTGGTGC TCTACTTGCT CGGCACGCAT GTGGAACGAT TCTTTGGCAC GCGCAGCTTC
CTGCTGATCT ACGTTGGCGC CGGCCTGCTC GGCAGCGCAT TGAGCCTCTA TTTCGCGGCG
CAGGCCTCGG TGTCCGTCGG CGCCTCGGGA GCGGTGTTCG GCATCGGCGG CGCGCTGCTT
GTCGCGGCAC TGCTGCATCG CCGCGAACTG CCGCAGAGCA TTCGCAATCG ACTCGTCAGC
GATGCCGTGA TCATGATCGG CTACTCGCTC GCACAGGGCT TCCTGTCGAC GCGTGTGGAT
AACGCCGCGC ATGTGGGTGG CTTGATTGGC GGCGCGCTGC TGGCGTTGTG CCTGCCGGTC
CGGCTGTCGC CGGAGACTTA CCGCAAGAAG CTGCGCCGTG GCACGTTGAT GGCCACCGTG
ACGGCCATCG TCGCGGTGGT CGGTGTGGCC GCGTTTGCGC CGCCCGCACC GCTGACCCTG
CGCGCCCAGC TGGCCGGTTC CCGACAGTTC GAAGTGGCCG CCGATCGCTT CATGACCGCG
CTTCGGGCGA CGCAAGCCGA TATCGAGGCC ATGAAGGCCG GCAAAATGCC CGAGCGCGAG
GTCGACGCGC GTACCCGAAC CATCCACGCG CCCGCCTTCG AGCAAGCGCT GTCCGGTCTG
GTGCGCGTCA CGCTGCCGCC CGGCGATTCG CGCGCGCCCT TGCTGCAGGA CATGACCCTG
CTGGCAGATG CCATGCACGA GTACCTGCGC ATGGATTCCG TCTGGGACGC CAGCGCCAAC
AGACACGTCC CCGCCGATGC CGCGCGTGGC GACGCATTGA ATGCCAATAT CGAGCGACTG
ACGCAACGGA TCAACACGCG CCTGGCTGAG AAGCGCAAGA AATAG
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| Protein sequence | MEQSQRWRQR ATPARPIGAF YVRQFGAALF MRLILWAIFG GLAALLLVSM RGNAGSVLMS
LVLLGILILF EWGWGRHAPL GKPLLTIDAS GIGSTAFPRK RRHLRWRDIA GAAIRDVRGA
GETLVIETVE TKPGGRRKAR RAYQVRLAML RKSDQQLVQA LVAHHMRVAG ITPSADVVAE
RAFVAQMQAL PRTWGLYSMI AVNVLIWLIM LSRGAALDGA APKMLIDWGG NLGALTQDGQ
WWRLLTATFL HGSLKHLAAN MVVLYLLGTH VERFFGTRSF LLIYVGAGLL GSALSLYFAA
QASVSVGASG AVFGIGGALL VAALLHRREL PQSIRNRLVS DAVIMIGYSL AQGFLSTRVD
NAAHVGGLIG GALLALCLPV RLSPETYRKK LRRGTLMATV TAIVAVVGVA AFAPPAPLTL
RAQLAGSRQF EVAADRFMTA LRATQADIEA MKAGKMPERE VDARTRTIHA PAFEQALSGL
VRVTLPPGDS RAPLLQDMTL LADAMHEYLR MDSVWDASAN RHVPADAARG DALNANIERL
TQRINTRLAE KRKK
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