Gene Rmet_3855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3855 
SymbolmetQ 
ID4040549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp397664 
End bp398485 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content63% 
IMG OID637979274 
ProductDL-methionine transporter subunit 
Protein accessionYP_585992 
Protein GI94312783 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen 
TIGRFAM ID[TIGR00363] lipoprotein, YaeC family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.704554 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAC GCTCCGCACT TGCTTCCCTG GCAGCCCTGG CCATCGCGCT GCCCGCATTC 
TCCATCGGCA CCGTCCACGC CCAAACGACG GGCAAGCCCC TCAAGGTGGG CGTGCGCGGC
GGAGTCGATG AAGAAATCTG GGAAGTTGTC ACGCGCGAGG CCGCGAAGAA CGGCCTGAAG
GTGGAGCCCG TGATCATCAC GGGCACCGCC AGCCCGAACG AGGCGCTGAA CAATGGTGAC
CTCGATGCCA ACTCGTTCCA GCACATCCCG TTCCTGCGTG ATCAGATCCG CCAGCGCGGC
TACAAGATCG TCAACGTCGG CACCACGCTG ATCTCGCCGA TCGCCTTCTA CTCGCGCAAG
GTCAAGTCGC TGGAAGCGCT GCCGAACGGC GCGCGCATCG GCATTCCGAA CGACCCGAGC
AATCAGACCC GCGCGCTGGT CATCCTGCGC GATCACGGTC TTGTCAAGCT CAAGGACGGT
TTCGATCCGT CCACGGGCAC GGCATCGCTG GCGGACATCA CGGCCAACCC GCGCAAGCTC
GATCTCGTTG AAAGCGCGTC GGTGGTGCTG CCGCGCGCGC TGCCCGATCT CGATGCCGCA
GCCATCATCA ACACGTTCGC GTACCAGGCC GGGCTGATTT CCTCGCGCGA CGGCATTGCC
GTCGAAAAGC GGGAGAACAA TCCCTACGTC AATGTGATCG CGGTGCGCGA GAAGGACAGG
AACGCGCCGT GGGTCGCAAC GCTCGTGAAG TCATATCAGT CCGACGCCGT GCGCAAGTTC
ATCCTGACCA AGTATCAGGG ATCGATCATC CCGGCATTCT GA
 
Protein sequence
MKRRSALASL AALAIALPAF SIGTVHAQTT GKPLKVGVRG GVDEEIWEVV TREAAKNGLK 
VEPVIITGTA SPNEALNNGD LDANSFQHIP FLRDQIRQRG YKIVNVGTTL ISPIAFYSRK
VKSLEALPNG ARIGIPNDPS NQTRALVILR DHGLVKLKDG FDPSTGTASL ADITANPRKL
DLVESASVVL PRALPDLDAA AIINTFAYQA GLISSRDGIA VEKRENNPYV NVIAVREKDR
NAPWVATLVK SYQSDAVRKF ILTKYQGSII PAF