Gene Rmet_3800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3800 
Symbol 
ID4040635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp340060 
End bp340923 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content65% 
IMG OID637979221 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_585939 
Protein GI94312730 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.964787 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATGG CGGGATGGCC AAGGATCGGC CAAGCTGACC GTGGTAGACG AAAAAAGGAG 
ACAGGCATGA CAGAAGAAGA CGGCTTGCTG GTGGCAATCT CGGATGGCGT GGCAACGCTG
ACGCTCAACC GTCCGAAGCA GAAGAACGCC CTGAACGGTT CCATGCGCGA CGGGCTATGC
GACGCAGTAC AGCGGATTCG CGCCGACCGC TCGGTGCGCG CCGTAGTGTT GCGCGGCGCA
GGCGAGGACT TCTGCTCCGG TGGCGACATC CGCGCGATGA ACGTGACGGA GGCGGACGCG
GGCCGCGCGC GCATGGACGA CATGCATGGC TGGATCGCCA TGCTGCTGGA TCTGGATCGT
CCCGTGGTCG CGGCGGTCGA TGGGGTGGCC TATGGGGCCG GCTTCAGTAT TGCGCTGCTT
GCCGATTTCA TCGTGGCGTC GCCGCGCGCG CGCTTCTGCA TGCCGTTCAT GAAAGTTGGC
CTGGTGCCCG ATTGCGGCGC GCTATACACG CTGCCGAGAG TGGTAGGCAT GGCGAAAGCG
CGGGAACTGG TGTTTAGCGC GCGCGAAATT GGCGCGGAGG AAGCGCGCCA GATTGGCGCC
GTGTTCGAGA TCGTGCCGGA AGACAAGCTC CATGCCCGCG CCGACGAACT GGCTCGTGGT
CTGGCCGGCG CTTCGCCGGC TGCATTCGCC ATGGCCAAAC GCGCGTTGAA CCAGTCGCTT
GGCAGCGACG TGCGTGCCAT GCTGGAAATG GAGTCGCTGG GGCAGGGCAT CGCCTTCACT
ACCAGCTACC ACCGCGAAGC TGTGCGCCGC TTCAAGGAGA AGGAGCCGCC GCTGTTCCGC
TGGCCTGCGG CGCCTCGGGA CTGA
 
Protein sequence
MQMAGWPRIG QADRGRRKKE TGMTEEDGLL VAISDGVATL TLNRPKQKNA LNGSMRDGLC 
DAVQRIRADR SVRAVVLRGA GEDFCSGGDI RAMNVTEADA GRARMDDMHG WIAMLLDLDR
PVVAAVDGVA YGAGFSIALL ADFIVASPRA RFCMPFMKVG LVPDCGALYT LPRVVGMAKA
RELVFSAREI GAEEARQIGA VFEIVPEDKL HARADELARG LAGASPAAFA MAKRALNQSL
GSDVRAMLEM ESLGQGIAFT TSYHREAVRR FKEKEPPLFR WPAAPRD