Gene Rmet_3722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3722 
Symbol 
ID4040693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp262884 
End bp263354 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content63% 
IMG OID637979145 
ProductCMP/dCMP deaminase 
Protein accessionYP_585863 
Protein GI94312654 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.804018 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.286118 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACGA ATCACGCGGA ACGATATCTG GGCGAAGCCA TTGAGCTGGC TCGCACCAAC 
CTGGAACAGG GCGGCCGGCC GTTCGGGGCC GTCATCGTGA AGGACGGTGA AGTGATCGCC
ACCGGCGTCA ATCAGATCCT GAGCACCAAC GACCCCACCG CTCATGCGGA ACTGACGGCC
ATCCGCGCCG CCAGCCAGAA GCTCGGCAGC CCCAGCCTGG ATGGCTGTGC CGTGTATGCC
AGCGGACATC CTTGCCCAAT GTGCATGGCG GCGATGCGGA TGGCGGGCGT GAAGGAAGTG
ACCTACGCCT ATTCGAACGA CGATGGCGAG CCATACGGTC TTTCCACCGC GGCCATCTAT
GCTGACCTGG CGAAGCCGTT CGCCGAGCAG TCGATGAAGA TCCGGTACAT GCCGGTGCGG
CCGGCATCGT GCCCGGATCT TTACGCGGAA TGGAAGCGCA GGGCCGGCTG A
 
Protein sequence
MNTNHAERYL GEAIELARTN LEQGGRPFGA VIVKDGEVIA TGVNQILSTN DPTAHAELTA 
IRAASQKLGS PSLDGCAVYA SGHPCPMCMA AMRMAGVKEV TYAYSNDDGE PYGLSTAAIY
ADLAKPFAEQ SMKIRYMPVR PASCPDLYAE WKRRAG