| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3702 |
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| Symbol | fliA |
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| ID | 4040673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 244062 |
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| End bp | 244778 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637979125 |
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| Product | RNA polymerase sigma 28 (sigma F) factor |
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| Protein accession | YP_585843 |
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| Protein GI | 94312634 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0322756 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTACACGA TTCAGGGAAA GCTCGAACAG GCAGACGTGG TCAAGTCGCA CGCGCCGCTG
GTGCGACGCA TCGCGTTGCA GCTGGCGGCG AAGCTGCCGG CCAGCGTGCA GATCGACGAC
CTGATCCAGG CCGGCATGAT CGGCCTGCTC GACGCCGCCA AGCGCTACGA GGACAACCAT
GGCGCGCGAT TCGAGACCTA TGCGAGCCAG CGCATTCGCG GCGCTATGCT CGACGAGGTG
CGCGCCAACG ATTGGCAATC GCGCAGTCTG CGCCAGTTCA CACGCAAGAT CGAACGCACG
CAGCGCCAGC TCGAGCAGAA ACTCGGCCGG AGCCCCATCG ACTCCGAAGT GGCGAAGGAA
CTCGAAATGG GGCTGGAGGA GTATCAGGAA CTGCTCAACG AAGTCCATGG CTGCCAGTTG
CTGCACTATG AGGACTTCGA ACGTTCCGGG GAAGAAGACT TCCTGGATCG GCACCTTGGG
GTGACCGACG AAGCGAATCC GCTCACGGTG CTGATGGAAT CGGGAATGCG TGACGCGCTG
ATCCGCGCCA TCGAGAAGCT GCCCGAGCGC GAGAAGCTGG TGCTCTCGCT TTGCTACGAC
CAGGAGTTGA ACCTGCGTGA GATCGGGGCC GTGCTGGAAG TGACCGAATC GCGCGTCTGC
CAGATCCGTA GCCAGGCCAT TACGCGGCTG CGCAACCAGC TTCGCGGCAT GTTGTGA
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| Protein sequence | MYTIQGKLEQ ADVVKSHAPL VRRIALQLAA KLPASVQIDD LIQAGMIGLL DAAKRYEDNH
GARFETYASQ RIRGAMLDEV RANDWQSRSL RQFTRKIERT QRQLEQKLGR SPIDSEVAKE
LEMGLEEYQE LLNEVHGCQL LHYEDFERSG EEDFLDRHLG VTDEANPLTV LMESGMRDAL
IRAIEKLPER EKLVLSLCYD QELNLREIGA VLEVTESRVC QIRSQAITRL RNQLRGML
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