| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3700 |
|---|
| Symbol | flhF |
|---|
| ID | 4040671 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 240649 |
|---|
| End bp | 243126 |
|---|
| Gene Length | 2478 bp |
|---|
| Protein Length | 825 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637979123 |
|---|
| Product | flagellar biosynthesis regulator FlhF |
|---|
| Protein accession | YP_585841 |
|---|
| Protein GI | 94312632 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1419] Flagellar GTP-binding protein |
|---|
| TIGRFAM ID | [TIGR03499] flagellar biosynthetic protein FlhF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.528557 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0206253 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTGG CAAAGTTTGT GGCGGCCAAC GGCCGTGAAG CGATGCGCAA GGTGCGCGAG
GCGATGGGCC CGGATGCCGT GGTGCTGTCG AACCGGACCA TCGATGGTGG CGTGGAGATC
GTCGCCATGC GCGACACCGA TCTCGGCGCG GTGAACGCCA ATGCGCAGCC TTATGTGTCG
CCCACGCCGG CCGCATCCCA GATTCTTGAG ACCGCCCCGG CGCAGATCGG CCCGATTGCC
ATCGCGGCGG CCAATGCCGT CGACGGGCAG GCTACCCGGA CCGACGACGG TGCCATTGGC
GATCTGCGTG GCGAGCTTGC GTCGATGCGT TCGATGCTCG AGCGCCAGTT TGCTGGCCTG
TCCAGCGGCG CCGGCAATGT GGCCGTGGGC GATCCGCTGC GCGAGTCGCT GTTCGAGTGG
ATGGTGAACG CGGGCTTCTC TGGCCAGTTG TCACGTACGT TGATCTCCCG TCTGCCAGTG
GGTACCGATC GTCCGGCCGC CATGTCGTGG ATTCGGCAGG AAATCGCGAA GAAGGTGCCT
GTGCTGTCCA ACGAGGACGC TCTGTTCGAT CAGGGCGGCG TGCTGGCGCT GATCGGACCG
ACCGGCGTGG GCAAGACCAC CACCACGGCC AAGCTGGCCG CGCGCTACGT GCTGCGCCAC
GGCGCCGATC GCCTGGCCTT GCTGACGACC GACCGCTTCC GGATCGGCGC GCACGAGCAG
CTTCGCATCT ACGGCGACAT TCTGGGCGTG CCGGTGCATG CGGTGAAAGA CGCCGCTGAC
CTGCGTTTCG CGCTATCGGC GATGAAGGAC AAGCATCTGG TCATCATCGA CACCGTTGGC
ATGAGCCAGC GCGATCGCAG CTTGTCCGAC CAAATCGCGA TGCTGGCTGG CGTGCAGGCG
CCGATGCAGC GCGTGCTGCT GCTCAACGGC GCCGCGCATG GCGATACGCT CAATGAAGTC
GTGCACGCCT ATCGGCACGA CGCAGCCGGC GACGCTGGTG GCATCGACGG GTGCATCATC
AGCAAGCTCG ATGAAGCGAC CCATCTGGGC TCGGTGCTCG ATGTGGTGAT CCGCCATCGC
CTGCCGGTTT TCTATGCTTC CACTGGCCAG CGCGTGCCGG AACATCTGGA ACTCGCGCAG
GCCAGCACAC TGGTGGAACG CGCGTTCATG ACGCCGCGTC GTGGCTCGCT GTTCAATGAC
GCCGACATGG CACGCCGCCA TGCCGTTGCA GCGGACGCTG CAACGCCGCG CCCGGCCGAG
CGCAATGGCG CCGATGACAT GCTGCGTTCG TTGACTGACA GCGCTAATGC CGTAGGCACG
TGCGTGGAAG AGTTGAACGC CGCAGGCTAC GGCTTCGATG TCGCGCGCCA GCTCTGGCAA
CAGCGCGGCG CCGGTGCCGT GGGATTGCGC CAGATGGGCC AGCAGGCACG CATGGCGATG
TGCCGCGACG CCAGCCGGGC CTGCGAGCGC TATGTGCTCG CCGTATCGCA GAATTTCACC
CAGCCGGTGC AAGGTCGTCG CGCGCCGCAG TTGATGCAAT GCACCCTGTG GCTTGCCGAT
CGGGACGGGA TGCCGCTGGC CGGTACCACC GCGCCCGTTG GCCGTACGCG GCAGTCGATG
TCAGAAGCGG ACGCCGATGC CGAAGCCGAG ACCGTGCGCG CCACGCTTTC TGCGGCACGT
ACCGTCGTCA ACCTGAATGC TTCGGTGCCA TCGGCCGCCG TGATTGCGCG CTGGCATCAG
CTCGGTGAGC GCTGGGTGGC GGGTACGCGT AAAACCGCGC GCGTGATCAC TGGTGGCGCG
GCCAGCAAGC TCGATGCGAT CGCCGACACG CTGACGTTTC ATGCGATTGG CGACACGACC
TGGCGCGACC GCGACGCTGT GCACTGGGTT GGTCACTGTG CCGTGCGGAT TCCGGAAGGG
ACGGTTCGTG CGGTTGGACG CGCTCGCGAT AACACGGCCG AGACCGGCAC CGAAGCGTGC
CTCGTTGTCT CCCGCATGGC GGATCGTGAT ACCGGCGAAA CGCTGGCGGT CGAGTACGTG
CTGTGCGACG CGGCGCTGAC CGATGACGCC GCGCAGGTCG CTCGCTGGAT GCAATGGGCG
AACGCCGCGG ACGAGCAGTT CCGCACGCTG CGTCATGCCG CCGAACACTT CGCGCAGGAC
GGCGATGCGT CGGACAGTCA GGGGACCAGC CTGGTGTCGC TCCAGCTCGG GCTGACCACG
CTGCGCCTGC AGCACACCCC CACCGCAACC GCACCGGCGT TCCTGTCACG CCTGGCCGGC
CGTGCCGCGA CGCGTGCGAA TGTGCCGGTG CCAGGCTCCG TGCTCAACGA GGGCATGGGT
CGCCTGCTGG CGCTACTGGA TGTGCTGGAG AACTATCCCG GACGTGCCGC CTCGCCTGCG
CTCGTCGGTG ATATCACTGC CGACGTGGCA ATGCAGGCGA CAGTCGGACT GCCGCAGTTG
GCAGTCGCGG GGGAATAA
|
|---|
| Protein sequence | MSVAKFVAAN GREAMRKVRE AMGPDAVVLS NRTIDGGVEI VAMRDTDLGA VNANAQPYVS
PTPAASQILE TAPAQIGPIA IAAANAVDGQ ATRTDDGAIG DLRGELASMR SMLERQFAGL
SSGAGNVAVG DPLRESLFEW MVNAGFSGQL SRTLISRLPV GTDRPAAMSW IRQEIAKKVP
VLSNEDALFD QGGVLALIGP TGVGKTTTTA KLAARYVLRH GADRLALLTT DRFRIGAHEQ
LRIYGDILGV PVHAVKDAAD LRFALSAMKD KHLVIIDTVG MSQRDRSLSD QIAMLAGVQA
PMQRVLLLNG AAHGDTLNEV VHAYRHDAAG DAGGIDGCII SKLDEATHLG SVLDVVIRHR
LPVFYASTGQ RVPEHLELAQ ASTLVERAFM TPRRGSLFND ADMARRHAVA ADAATPRPAE
RNGADDMLRS LTDSANAVGT CVEELNAAGY GFDVARQLWQ QRGAGAVGLR QMGQQARMAM
CRDASRACER YVLAVSQNFT QPVQGRRAPQ LMQCTLWLAD RDGMPLAGTT APVGRTRQSM
SEADADAEAE TVRATLSAAR TVVNLNASVP SAAVIARWHQ LGERWVAGTR KTARVITGGA
ASKLDAIADT LTFHAIGDTT WRDRDAVHWV GHCAVRIPEG TVRAVGRARD NTAETGTEAC
LVVSRMADRD TGETLAVEYV LCDAALTDDA AQVARWMQWA NAADEQFRTL RHAAEHFAQD
GDASDSQGTS LVSLQLGLTT LRLQHTPTAT APAFLSRLAG RAATRANVPV PGSVLNEGMG
RLLALLDVLE NYPGRAASPA LVGDITADVA MQATVGLPQL AVAGE
|
|---|
| |