Gene Rmet_3680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3680 
Symbol 
ID4040496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp219489 
End bp219872 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content65% 
IMG OID637979103 
Productresponse regulator receiver domain-containing protein 
Protein accessionYP_585821 
Protein GI94312612 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.383377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.047176 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTCC TGAGCATTCT TGTCGTCGAT GATTCACCAT CCCTGCGCCG GATGACCAGC 
GCCTGTCTGC GTGCCGGCGG CTATGGGGTG ACCGAGGCGT CCGACGGCAA GGAGGCGTAT
GAGGTCGCGC GGGAGGGCAA CTTCGACATG CTGGTGACCG ATCAGGTCAT GCCGGTCATG
GATGGCCTGT CCCTGATCCG CGCGTTGCGC GCTATGCCGG ACTACGCCAC GGTGCCGATG
CTGATGCTGT CGACGGAGCA TGACGATGCC ATCCTCGAAC GCGCCCGTGA GGCCGGCGCA
TCGGGGTTCC TGGCCAAGCC GTTCGACCCC GATGAACTCA TGGCGTCGGT CGACGCGCTG
CTGGGCCCTC CCAACGTAGG GTGA
 
Protein sequence
MSLLSILVVD DSPSLRRMTS ACLRAGGYGV TEASDGKEAY EVAREGNFDM LVTDQVMPVM 
DGLSLIRALR AMPDYATVPM LMLSTEHDDA ILERAREAGA SGFLAKPFDP DELMASVDAL
LGPPNVG