| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3665 |
|---|
| Symbol | |
|---|
| ID | 4040481 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 203005 |
|---|
| End bp | 204441 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637979088 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_585806 |
|---|
| Protein GI | 94312597 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGTATCC ATCGTCGTCC AGAAGCTGTT CGTGCCCTGG TGGCCGCCGT GCTCGTGACC
TGCGCCGCAG GGGCCGTTGC CCAGAGCCTG CCCGCCAGCA AGGCGCCCCC CGCCACGCTC
ACGCCCGACC AGCAGCGTTT TCACGATATC TACAAGGAAC TGGTCGAGAT CAACACGACG
CATTCGGCCG GGGACAGTGC CCAGGCGGCG CGCGCGATGG AGAAGCGACT GGTGGAGGCA
GGCTTCTCCG CGTCGGATAT CCAGGTGTTC GAGCCGTTTC CGCGCAAGGG CAATCTGGTG
ATGCGCTTCA AGGGCACCGG CGCCAGGCAG CCGGTTCTGC TGCTGGCGCA TATCGACGTC
GTGGAGGCCA AGCGCGAGGA CTGGAAGACC GACCCCTTCC AGCTTCAGGA GACCAATGGC
TACTTCACCG CGCGTGGCTC CATCGACGAC AAGGCGATGG CGTCGGCGTT CGTGTCGGTG
CTGGGGCAGT TGAAGCAGGA AGGCTTCAAG CCGTCGCGCG ACATCATCCT GGCGCTCACG
TCCGACGAGG AGCGCGGCGA CGTGCCCAGC AATGGCGCCG ACTGGCTGGT GAAGAACAAG
CCTGAACTGC TGAAGGCCGA GTTCGGCATC AACGAGGGCG GCGGCGGCGA GCTGCGCGAC
GGCAAGCCGG TGCTGCACCG CGTTCAGGTG GCCGAGAAGA TGTACACGAC CTACGAACTG
GAAGTGCGCG ACGTGGGCGG GCATAGCTCG GTGCCGACCA AGTCCAATCC TGTGTACGCG
ATGTCCGAGG CGCTGAGCCG CCTGGGTGCG TACCAGTTCC CGGTCAAGAT GGCCGACGTG
ACGCAGACCT ACTTCGCGCG CAGCGCTCCG CTGGCGAAGG GGCAGCTTGC CGAGGACATG
CGCGAGGTTG GCACGGGCCG TCCGAGCCAG GCGGCGATCG ACCGGCTGTC GGCCATTCCG
TTCTACAACG CACAGCTTCG CACCACCTGT GTGGCGACCA TGGTCAATGC GGGGCACGCC
GAGAACGCGC TGCCGCAATC AGCCAAGGCC ATCGTCAACT GTCGCATCCT GCCGCATGAC
GATCCGGCCG ACATCGACCG CCAGCTCAAG TCGGCCCTCG GTAACGACAA GATCAGCGTG
CGATACATCA ACAAGCCGCT GGCCAGCCCG GCCTCTCCGC TAGACGGCGC GCTGATGAAG
GAAGTCGACG CGCTGACCAA GCAGATGTGG GATGTGCCGG TGATTCCGGC CATGAGCACG
GGCGCAACCG ACAGCCGCTT CATGCGCAAT GCCGGTATCC GGATGTACGG CGTTTCCGGC
CTGTTCACCG AACCGTCGGA CATGCGCGCG CATGGTCTGG ACGAGCGCAT CGAGATTGCG
CGCCTGTACG ATGGCCGCGA GTTTCTCTAC CGTCTGGTGA AGCGGTTGTC GGAATAA
|
|---|
| Protein sequence | MRIHRRPEAV RALVAAVLVT CAAGAVAQSL PASKAPPATL TPDQQRFHDI YKELVEINTT
HSAGDSAQAA RAMEKRLVEA GFSASDIQVF EPFPRKGNLV MRFKGTGARQ PVLLLAHIDV
VEAKREDWKT DPFQLQETNG YFTARGSIDD KAMASAFVSV LGQLKQEGFK PSRDIILALT
SDEERGDVPS NGADWLVKNK PELLKAEFGI NEGGGGELRD GKPVLHRVQV AEKMYTTYEL
EVRDVGGHSS VPTKSNPVYA MSEALSRLGA YQFPVKMADV TQTYFARSAP LAKGQLAEDM
REVGTGRPSQ AAIDRLSAIP FYNAQLRTTC VATMVNAGHA ENALPQSAKA IVNCRILPHD
DPADIDRQLK SALGNDKISV RYINKPLASP ASPLDGALMK EVDALTKQMW DVPVIPAMST
GATDSRFMRN AGIRMYGVSG LFTEPSDMRA HGLDERIEIA RLYDGREFLY RLVKRLSE
|
|---|
| |