| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3664 |
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| Symbol | sbcC |
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| ID | 4040480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 199707 |
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| End bp | 202760 |
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| Gene Length | 3054 bp |
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| Protein Length | 1017 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637979087 |
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| Product | dsDNA exonuclease SbcC |
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| Protein accession | YP_585805 |
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| Protein GI | 94312596 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC
[TIGR03185] DNA sulfur modification protein DndD |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCGC TTTACCTGAA ACTGCAGGCC TTCGGCCCGT TCGCCGCCAC GGAGACGATT
GACTTCACGC GGCTCGGCGA CCAGGCGTTC TTCCTGATCC ACGGCCCCAC GGGCGCAGGC
AAGACCACGC TGCTCGATGC CATCTGCTTC GCGCTCTATG GCGATACATC AGGTGGCGAG
CGCAGCGCGC AGGACATGCG CAGCGCCAAT GCGGACCCAG CCCTGCGGAC CGAGGTCACC
TTGGAGTTCT CGCTTGGGGC GACACGCTAT CGCGTGACGC GTTCTCCGAC GCAGGACCGC
CCGAGCCCGC GTGCGGCCGG CGGCTTCGTC AAGGAGACTG CGAAGGCGCA GCTCGATGCC
CAGGTGGACG GTGAGTGGAA AAGCCACGCC AGCCAGCCGG TCCGTGTGAC CGACGCGGTG
CGAGTCCTGC TCGGCTTCGA CAGCGCGCAG TTCCGGCAGG TGATCGTGCT GCCGCAGGGA
CGTTTCCGCG AATTGCTGAC GGCGGACTCG AAGGCGCGGC AGTCGATCCT CGAGCGTCTG
TTCCAGACCG AGCTCTACCG CCGCGTCGAG GAACTGCTCA AGGAGCAGGC CGCGAGCATT
CGCCGCGAAG CCGAGGAGAT CTCGGTACGA CGCAAGACCT TGCTGGAACA GTATCAGTTG
CCCTCCGAGC TGGCGCTTGA CGAACGTATC GCCGCGCATC GGGAGACGTT GACCGAGCTG
GAACGGCGCG AAGCGCTGGC GCGTGCGGGT AGCGAAGCGG CGCAGGCGTC CTTGCGCAAG
GGCGAGCTGG AGAGCACGCA GATCAAGGCC TGGAAAGAGG CGGAGGGCGC CTATGCCGTG
CTGTCGGCCC GCGTGCCGGC GGTCGACACG GACCGCGCTC GCCTGCAGGC CGCGCGACGC
GCGGCGCAGG TGACGCCGGT TGCGCAACTG CTTGAGGTTG CCAGACAGGA TCAGACGGCC
GCACTCGCCG CGAATGCCGC CGCCGGGACA CGCGTGGCAA GCGCCAGCCG GGCCGCCGAT
ATCGCAACAG GTGCGCTGCG CGCGGAACAG GCGCGTGGCG AAGCGCGTTT GGCCGCGCAA
CGCACCGTGG CGAAACTGGA AGCAATTCTC CCGCAGGCAC GCAGGCTTGG CGTGCTGCGC
AACGGCGTGG CGCTGGCGAG TACCGGACTG GCCGCTGCCC AGGTGGCGCT TACCGCCAAG
GCGAAGGCGC GCGATGCCGC CGTGGCGGCG GCGAAGACGC TGGAAGGCGA GCTGGAGCTT
GCGCGGCGCG ACGGCGCAAA TGCGCAGGCC CTGCAGCTTC AGCTTGGACT GGCGCGCGAA
CGCGCGACGC GGGTGGCACG TTGCCGGCAA CTCGATGCCG AACTTGGGCC TTTGCGCGAA
TCGCTTGCCG CTGCGGAAGC CGGCGCCAGC CGGGCGACGC AGACGCGCGA TACCGCGCGC
GTCGCAATGC GTCAGGCGGA ATCGGACTGG CGCTTTGGCC AGGCGGCACG CCTTGCCGCT
GGCGTGAAGC GTGGCGAACC TTGCCCCGTC TGTGGTGGCA AGGACCACCC TGCGCTGGCG
CAGCAGACGC TGGCGCTGGT GACCGACGAG GACCTCGATA CCACGCGAGC CGTCTTGCAA
CATGCCGACG AGGCGTTGGC CGACGCGCAG GCCGTGCGAC AAAAGGCCGA GGCAAACGTC
GCCCAATGTC AGGTGCGTCT GGCGGATCTG CGCGAAGGCG CGGGCGATGT GTCCGACGCG
GGCGTGCAGG CGTTAGATCA GGAAATCCAG ACGCTGACCG CCAGCGGCGC GAAGGCCGAG
GCTGCGGCAA CCCGCGCGGA ACGGCTCGCG GCCCAGACCA TACAGGCGCG TCAGGCGCAG
GAGTCTGCCG AAGCCGCAGT GCAGGCGGCC GAAGGCGCAT TGCGCACGGC GATGCATGAG
CACGCTCAGC AAGATGGCGA GTGGCGTGCC GCGAGTGCGC AGGTGCCCGA GGATTCGCGT
GACCCTGACG TCGTGACCGC ATCGCTCGAA GCCGCGCAGC GCGAAGCCGG CGCACTGGAG
GCCGCATTGC AGGCGGCCCA GGGCGCCGAG CGCGATGCGG TGGCACTGCT GGCCGGTGCG
AATGCGGCAC TGGCCGCCGC GCGCGAAGCC ACTACTCGTG CCGAGGAGCG GGCCGCGCAA
CGCGAAGCCG CCTTTGTGGA GGCACTTGCC ACCGCCGGAT TCGCCGGAGC GGACGACTAC
CGCGCCGCAT CCCTGGCTGA CGATGCCACG CGCGTGCTTG ACGACGCCGT GCGTGCGTTC
GATGTCGATC TGGCTCGCGC CGCGGAATGG CGCCAACGCA CGGCGGAAAT CGGTCAGGCG
TTGCAGACGC CGGACATGCC TGCATTGCTC GCGGCACGCG ATGCGGCGGC TGTTCAGCTT
GAAGCGGCGA TCCGGCAGCG CAGCGAACTG GCCGCGGTGC GCGATGCGCT GTTGCAGTGC
AAGGGCTTGC TCGATTCGCT GGCCGCCGAA GGACGCGACG TCGAGACGCG CTACGCAGTG
CTCGGCCGCC TGTCGGAAGT GGCGAACGGC AATAATCCGC GCCGCATGAC GTTCCAGCGT
TTCGTGCTGG CCACGTTGCT CGACGAGGTG CTGGAAGCTG CGTCGCTACG GCTGTTGCGC
ATGAGCCGGG GTCGCTACGC GCTGCAACGT GTGCGAGAGC AGGGCGATCA GCGCGTGGCC
GGTGGCCTTG ACCTCGAAGT GTTCGACCAC GATACCGGCG GCACGCGCCC GGCCAATACG
CTGTCCGGCG GCGAAGGCTT CCTGGCGTCA CTGTCGCTGG CGCTGGGTCT GGCCGATGTG
GTGCAGTCGC GTGCCGGTGG CATCCAGCTC GATACGCTGT TCGTTGACGA AGGCTTCGGC
ACGCTCGATC CGGAAAGTCT CGACTTCGCG ATTCGCACGC TGCTCGATCT TCAGCAGGCC
GGACGGCTGG TCGGCATCAT CTCGCACGTA ACCGAACTGC GCGAGCGGAT CGACGTGCGG
CTTGAGGTCC GGCCCGGCGT GGCGGGCAGT CAAGCCGTGT TGCGCCTGCC CTGA
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| Protein sequence | MKPLYLKLQA FGPFAATETI DFTRLGDQAF FLIHGPTGAG KTTLLDAICF ALYGDTSGGE
RSAQDMRSAN ADPALRTEVT LEFSLGATRY RVTRSPTQDR PSPRAAGGFV KETAKAQLDA
QVDGEWKSHA SQPVRVTDAV RVLLGFDSAQ FRQVIVLPQG RFRELLTADS KARQSILERL
FQTELYRRVE ELLKEQAASI RREAEEISVR RKTLLEQYQL PSELALDERI AAHRETLTEL
ERREALARAG SEAAQASLRK GELESTQIKA WKEAEGAYAV LSARVPAVDT DRARLQAARR
AAQVTPVAQL LEVARQDQTA ALAANAAAGT RVASASRAAD IATGALRAEQ ARGEARLAAQ
RTVAKLEAIL PQARRLGVLR NGVALASTGL AAAQVALTAK AKARDAAVAA AKTLEGELEL
ARRDGANAQA LQLQLGLARE RATRVARCRQ LDAELGPLRE SLAAAEAGAS RATQTRDTAR
VAMRQAESDW RFGQAARLAA GVKRGEPCPV CGGKDHPALA QQTLALVTDE DLDTTRAVLQ
HADEALADAQ AVRQKAEANV AQCQVRLADL REGAGDVSDA GVQALDQEIQ TLTASGAKAE
AAATRAERLA AQTIQARQAQ ESAEAAVQAA EGALRTAMHE HAQQDGEWRA ASAQVPEDSR
DPDVVTASLE AAQREAGALE AALQAAQGAE RDAVALLAGA NAALAAAREA TTRAEERAAQ
REAAFVEALA TAGFAGADDY RAASLADDAT RVLDDAVRAF DVDLARAAEW RQRTAEIGQA
LQTPDMPALL AARDAAAVQL EAAIRQRSEL AAVRDALLQC KGLLDSLAAE GRDVETRYAV
LGRLSEVANG NNPRRMTFQR FVLATLLDEV LEAASLRLLR MSRGRYALQR VREQGDQRVA
GGLDLEVFDH DTGGTRPANT LSGGEGFLAS LSLALGLADV VQSRAGGIQL DTLFVDEGFG
TLDPESLDFA IRTLLDLQQA GRLVGIISHV TELRERIDVR LEVRPGVAGS QAVLRLP
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