| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3613 |
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| Symbol | |
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| ID | 4040462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3924633 |
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| End bp | 3926300 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637979031 |
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| Product | putative inner membrane protein translocase component YidC |
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| Protein accession | YP_585754 |
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| Protein GI | 94312544 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATCA AACGCACCAT CCTGTGGGTC ATCTTCTCGA TGTCCCTCGT GCTGCTCTAC
GACAACTGGC AGCGCGCCAA CGGCCACGCG TCGATGTTCT TCCCGAGCGC CAACACGCAG
CAGGCCGCCC CGGCCGGCGC TGGTGGCGCT ACGCCTCAGG CCGACGTGCC CAAGGCGAAC
GCGACGAACG CAGCCCCTGG AACGGTTCCG GCAGCGCCGC AAGCGGCTGC ACAGCCGGTC
GGCGAGAAGG TCACCGTGAC TACCGACGAG GTGCGCGCCG AGATCGACAC GGCCGGCGGC
ATCCTGTCGC GCCTGGAACT GCTCAACGAG CATGAGAAGG ATGGCGCGCC GGTCGTCCTG
CTTGAACGCG ACGTCAATCG CACCTACCTG GCCCGCTCCG GCCTGATCGG TGGCGACCTG
CCGAACCACA CCACCGTGTT CACGGTGGCG CCGGGCGCGC GCACGCTGGC ACCGGGCCAG
GACAAGCTCG ACGTAGTGCT GACCGCCGAG AAGAACGGCG TGAAGTTCGT CAAGACCTAC
ACGTTCCACA AGGGCAGCTA CGTGGTCGAC ACGCGCTTCG ACGTGACCAA CACGGGCACC
GCGGCGGTTT CGCCGACGCT GTACCTGGAA CTGGCGCGTG ATGGCAGCAA GGTCGAGAAA
TCGCAGTTCT ACAGCACGTT CACGGGCCCG GCGATCTACA CGAACGCCGA CAAGTACCAC
AAGCTCACCT TCGAAGACAT CGCCAAGGGC AAGGCCACCG TGCCGGCCGC CACCGACAAC
GGCTGGGTGG CGATGGTGCA GCACTACTTC GCATCGGCCT GGATTCCGCA GACCGGCAAG
CAGCACAGCT TCTACGCCGA GCAGATCGAC CCGAACCTGT ACCGCGTGGG TATCCAGCAA
CCGCTGGGTC AACTGGCCCC GGGCGCAACG GTCAGCACCG ATGCCCGCCT GTTCGCCGGC
CCGCAGGAAG AACGCATGCT CGAGCAGATC ACCCCGGGCC TGGAACTGGT GAAGGACTAC
GGCTGGCTGA CTATCCTGGC CAAGCCGCTG TTCTGGCTGC TGGAAAAGCT GCACGGCTTC
CTGGGTAACT GGGGCTGGTC GATCATCGGG CTGACCGTGC TGATCAAGCT CGTGTTCTTC
CCGCTGTCGG CTGCCAGCTA CAAGTCGATG GGCAAGATGA AGGACCTGCA GCCCCGCATG
ACGGCCATCC GCGAGCGCCA CAAGGGCGAT CCGCAGAAGA TGAACCAGGA AATGATGGCG
CTGTACCGCA CCGAGAAGGT CAATCCGCTC GGCGGCTGCC TGCCCATCGT GATCCAGATT
CCGGTGTTCA TCGCGCTGTA CTGGGTGCTG CTGTCGTCGG TGGAAATGCG CGGCGCGCCG
TGGCTGGGCT GGATTCACGA TCTGTCGGTG CCGGATCCGT TCTACATCCT GCCGATCGTG
ATGGCCGTGT CGATGTTCGT GCAGACCCGA CTGAACCCGA CCCCGCCGGA CCCCGTGCAG
GCCAAGGTCA TGATGATCAT GCCGCTGGTG TTCTCGTTCA TGTTCTTCTT CTTCCCGGCC
GGCCTGGTGC TGTACTGGGT GGTGAACAAC ATCCTGTCGA TCGCCCAGCA ATGGCAGATC
AACCGGATGC TCGGCAAGGG CAAGACGGCT GCGGTAGCCA AGAGCTGA
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| Protein sequence | MDIKRTILWV IFSMSLVLLY DNWQRANGHA SMFFPSANTQ QAAPAGAGGA TPQADVPKAN
ATNAAPGTVP AAPQAAAQPV GEKVTVTTDE VRAEIDTAGG ILSRLELLNE HEKDGAPVVL
LERDVNRTYL ARSGLIGGDL PNHTTVFTVA PGARTLAPGQ DKLDVVLTAE KNGVKFVKTY
TFHKGSYVVD TRFDVTNTGT AAVSPTLYLE LARDGSKVEK SQFYSTFTGP AIYTNADKYH
KLTFEDIAKG KATVPAATDN GWVAMVQHYF ASAWIPQTGK QHSFYAEQID PNLYRVGIQQ
PLGQLAPGAT VSTDARLFAG PQEERMLEQI TPGLELVKDY GWLTILAKPL FWLLEKLHGF
LGNWGWSIIG LTVLIKLVFF PLSAASYKSM GKMKDLQPRM TAIRERHKGD PQKMNQEMMA
LYRTEKVNPL GGCLPIVIQI PVFIALYWVL LSSVEMRGAP WLGWIHDLSV PDPFYILPIV
MAVSMFVQTR LNPTPPDPVQ AKVMMIMPLV FSFMFFFFPA GLVLYWVVNN ILSIAQQWQI
NRMLGKGKTA AVAKS
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