| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3590 |
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| Symbol | |
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| ID | 4040439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 3900042 |
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| End bp | 3901517 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637979008 |
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| Product | RND efflux system outer membrane lipoprotein NodT |
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| Protein accession | YP_585731 |
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| Protein GI | 94312521 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAGA CTTTGACCAC TCTACTGCTG GTGGCCGGGG TGCTGAGCGG CTGCACGATG
GCGCCGCACT ATGACCGCCC CGCCGCACCT GTGGCGGGCG GCTACCCGGC AGCGCCGGAA
GGTTATGCCT CGGCCGAGGT GAAGAGCGGT GAAACGCGCC GCGCCACCGA GATCGGCTGG
CGCGAGTTCT TCACCGACCC GCGCCTGCAA GGGCTGATCG AGGCGGCGCT GGAGAACAAC
CGCGACCTGC GTACCGCCGC GCTCCGCATC GAAGAGGCGC GCGCGCAGTA CCAGATCCAG
CGCGCCGACC TGCTGCCGAC TGTGAATGCG AATGCCGGCT TCCAGCGCGG CCGCTTCTCG
GGCGCCTCGT CGGGTATCGA CCAGTCGTTC ACGGGTAACG TGTACCAGGT CGGCCTGTCG
GTAACGCAGT GGGAGCTCGA CTTCTTCGGC CGCGTGCGGA GCCTTTCGAA CGCCGCGCTG
GCGCAGTACC TGGCCACCGA GGAAGCGCAC CGCGCCGCGT ATATCTCGCT GGTTTCGGAG
GTCGCCAAGG CCTATCTGGC CGAACGCGCC TTTGCCGAGC AGTACGATCT GGCCCGCGAC
ACCTACAAGG CGCGCCAGAG CACGTACGAA CTGGCGCAGA AGCGCTTCAG CGCCGGCGCG
ACATCCGCGC TGGACCTGCG CGACAACGAA TCGCTGGTGG CGCAGGCCCG CGTGGCCGCG
GCGCAGCTGG CGCGTCAGCG CGCGCAGGCG CAGAACGCGC TGGAAGTGCT CGTGGGCAAG
CCGATCGCCG AGATCCCGAA CCTGCCTGCG CCGATGCGTC TGTCGGACGA ACACATCATC
AGCGATATTC CTGAGGGCCT GCCCTCGGAG CTGCTGACGC AGCGTCCGGA CATCCGCCAG
GCCGAGCAGC AGCTGTTGTC GGCCAACGCC AACATCGGCG CGGCGCGGGC CGCATTCTTC
CCGCGCATCA CGATGACGGC CAATGCCGGC ACCATCAGCA CGTCGTTCAC GAACCTGTTC
GACTCGGGCG CCCACGTGTG GTCGTTCGCG CCGCAACTCG TGCTGCCGAT CTTCGACTAC
GGCCGAAACA TGTCGAACCT GGACCTGTCC AACGTCCGCA AGAACATCCA GATCGCCAAC
TACGAGAAGA CGATCCAGAC CGCGTTCAGC GAAGTGGCCG ATGCCCTCGT GGCACGCGGC
ACGCTCGAGG ACCAAGTGGC AGGCCAGGAA CAGCAGCGTG ACGCGGAAGC CGCGCGCTAC
GAACTGGCGC GGATGCGCTT CCGCAGCGGC GTGGCGAGCT ACCTCGACGA ACTCGACGCA
CAGCGCCAGC TGTTCTCGGC CGAGCAGGAT CTGGTTGCGG CACGGCAGTT GCGGTTGGTG
AACTCGATCG ACCTCTACCG CGCGCTGGGT GGCGGGCTGG TGGAGAAAGG ACCGGTGGCG
CAGCAGCCGG CACCGCAGAC AACGACGACG CAGTAA
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| Protein sequence | MTKTLTTLLL VAGVLSGCTM APHYDRPAAP VAGGYPAAPE GYASAEVKSG ETRRATEIGW
REFFTDPRLQ GLIEAALENN RDLRTAALRI EEARAQYQIQ RADLLPTVNA NAGFQRGRFS
GASSGIDQSF TGNVYQVGLS VTQWELDFFG RVRSLSNAAL AQYLATEEAH RAAYISLVSE
VAKAYLAERA FAEQYDLARD TYKARQSTYE LAQKRFSAGA TSALDLRDNE SLVAQARVAA
AQLARQRAQA QNALEVLVGK PIAEIPNLPA PMRLSDEHII SDIPEGLPSE LLTQRPDIRQ
AEQQLLSANA NIGAARAAFF PRITMTANAG TISTSFTNLF DSGAHVWSFA PQLVLPIFDY
GRNMSNLDLS NVRKNIQIAN YEKTIQTAFS EVADALVARG TLEDQVAGQE QQRDAEAARY
ELARMRFRSG VASYLDELDA QRQLFSAEQD LVAARQLRLV NSIDLYRALG GGLVEKGPVA
QQPAPQTTTT Q
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