Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3569 |
Symbol | |
ID | 4040418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 3870647 |
End bp | 3873322 |
Gene Length | 2676 bp |
Protein Length | 891 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637978987 |
Product | DNA topoisomerase III |
Protein accession | YP_585710 |
Protein GI | 94312500 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA |
TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid [TIGR01057] DNA topoisomerase I, archaeal |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAAAG CCCTCATCAT CGCGGAAAAG CCATCGGTCG CCGCCGATAT CGCGCGCGCC CTCGGGGGCT TTACCAAGCA CGACGAGTAT TTCGAGAGCG ACGACTACGT GCTGTCCTCG GCCGTCGGTC ACTTGGTAGA GATCGCGGCG CCCGACGATT ACGAGGTGAA GCGTGGCAAG TGGAGCTTCG CCAATCTGCC GGTGATCCCG CCGCACTTCG ATCTGCGCCC GATCGCCAAG ACCGAGTCTC GCCTCAAGGT GCTGAACCGC CTGATCAAGC GCAAGGACGT GACCGCGCTG ATCAATGCCT GTGACGCGGG GCGCGAAGGG GAACTGATCT TCCGACTGAT CGCCCAGCAG GCCAAGGCCA AGCAGCCGGT GCGCCGCCTG TGGCTGCAGT CGATGACGCC GCAGGCCATC CGCGACGGGT TTGCCGCGCT GCGCGAGGAC GAGGAAATGC TCCCGCTGGC CGACGCGGCC CGCTGCCGCT CCGAAGCCGA CTGGCTGGTC GGCATCAACG GCACGCGTGC CATGACGGCC TTCAACAGCA AGGGCGGCGG CTTTTTCCTG ACCACCGTGG GCCGGGTACA GACGCCGACG CTGTCGATCG TGGTCGAGCG CGAGGAGAAG ATCAAACACT TCGTCCCCCG CGACTACTGG GAGGTGCGGG CTGAGTTCAT CGCCGCCGCG GGCCTCTATG AGGGTCGCTG GTTCGACCCG AAGTTCAAGA AGAACGAATT CGATCCCGAG GCGCGCGACT CGCGCCTGTG GAGCGAGGCG GAAGCCAAGA GCATCGTGGC GGCCTGCCGT GACAAGCAAG GCACGGTCAC CGAGGAGTCC AAGCCGTCGA CGCAGCAGTC GCCTGCCCTG TTCGACCTGA CCACCCTGCA GCGCGAAGCC AACTCGCGCT TTGGATTCTC GGCCAAGAAC ACGTTGGGCC TGGCGCAGGC GCTGTACGAA AAGCACAAGG TGCTGACGTA CCCGCGTACC GATGCGCGCG CGCTGCCGGA GGACTACCTG GACACGGTCA AGCAGACCAT GGACATGCTG GCCGACAGCT CGCCGAACTA TCTGCCGCAC GCGAAGAAAA TTCTGTCGAG CGGCTGGGTG AAGCCGAACA AGCGGATCTT CGACAACAGC AAGATCAGCG ATCACTTCGC TATCATCCCG ACCCTGCAGG CGCCCAAGAA CCTGTCCGAG CCCGAGCAGA AGCTGTACGA CCTGGTCGTG CGACGCTTCC TGGCGGTGTT CTTCCCGACC GCCGAGTTCC AGGTGACCAC GCGGATCACC GAGGTTGCCG GCCACCACTT CAAGACCGAG GGCAAGATCC TGGTCAATCC GGGCTGGCTG GTGATCTACG GCCGCGAGGC GCAGGGCAAG GACGACAAGG ACGCCAACCT GGTGCCGGTG CAGAAGGACG AGAAGGTCAA GACCGACAAG GTCGAGTCCG TCGGCCTGAC CACGCGCCCG CCGGCCCGCT ATAACGAAGC GACGCTGCTG TCGGCCATGG AAGGTGCCGG CAAGCTCGTG GACGACGATG CGCTACGCGA GGCGATGGCA GGCAAGGGCC TGGGCACGCC AGCCACGCGC GCGGCCATCA TCGAAGGCTT GCTGGCTGAG AAGTATCTGG TCCGCGAAGG CCGCGAGCTG ATTCCCACGG CCAAGGCGTT CCAGCTGATG ACGCTGTTGC GCGGGCTGGG CGTGGAGGAA CTGACCCAGG CCGAACTGAC GGGTGAGTGG GAACACAAGT TGTCGCAGAT CGAGCGCGGA CGTCTGAAGC GTGACGAGTT CATGCGCGAG ATCGCGCAGA TGACGCAGCA GATCGTCAAG CGTGCCAAGG AATACGACAA CGACACGATT CCAGGCGATT ACGCGACGCT CGACACGCCG TGCCCGCAGT GCGGTGGCCA GGTCAAGGAG AACTACCGCC GCTTTGCCTG CACGGCCTGC GAATTCTCGA TCAGCAAGAT CCCTGGCGGC CGCCAGTTCG AGATCGAGGA AGTCGAGGAA CTGCTGCTGA AGAAGGAAAT CGGCCCGTTG CAGGGATTCC GCAGCAAGAT GGGCCGGCCG TTCGCGGCCA TCCTGAAGTT GGCCAAGGAT GACGACGGCA ACTGGAAGAT GGAGTTCGAC TTCGGCCAGA ACGACGACGA AGGCGATGGC GAACCGGTGG ACTTCAGCGA GCAGACCCCG GTCGGCAAGT GTCCGAAGTG CGGTGGCTCG GTCTACGAGC ACGGCATGAA GTACGTCTGC GAGAACGCCG TGGGCAGCGC GAAATCGTGC GACTTCACCA GCGGCAAGAT CATCCTGCAG CAGGAAATCT CGCGTGAGCA GATCGGCAAG CTGCTGACGG ATGGCAAGAC CGACCTGCTG ACTGGCTTCA AGTCGTCGCG TACCGGCCGC AACTTCAAGG CTTTCCTGGT CAAGCAGCCG GACGGTAAGA TCGGGTTCGA GTTCGAGGCG CGTGAACCCA AGGCGGGCGC GGCGGCCAAG ACCGCGAAGC CTGCGGCCAA GTCCGCGGCC AAGGCAGAGT CGGCACCGGC AAAGGTAGCC GCCAAGAAGG CGCCGGCGGC GAAGAAGGCC GCCACGAAGA CGGCGACAAA GACGGCTGCT ACGAAGACGG CTGCTGCCAA GAAGACGCGC GCAACCACAA AGCAGACGGC CGAAGCCGAA GAGTAA
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Protein sequence | MSKALIIAEK PSVAADIARA LGGFTKHDEY FESDDYVLSS AVGHLVEIAA PDDYEVKRGK WSFANLPVIP PHFDLRPIAK TESRLKVLNR LIKRKDVTAL INACDAGREG ELIFRLIAQQ AKAKQPVRRL WLQSMTPQAI RDGFAALRED EEMLPLADAA RCRSEADWLV GINGTRAMTA FNSKGGGFFL TTVGRVQTPT LSIVVEREEK IKHFVPRDYW EVRAEFIAAA GLYEGRWFDP KFKKNEFDPE ARDSRLWSEA EAKSIVAACR DKQGTVTEES KPSTQQSPAL FDLTTLQREA NSRFGFSAKN TLGLAQALYE KHKVLTYPRT DARALPEDYL DTVKQTMDML ADSSPNYLPH AKKILSSGWV KPNKRIFDNS KISDHFAIIP TLQAPKNLSE PEQKLYDLVV RRFLAVFFPT AEFQVTTRIT EVAGHHFKTE GKILVNPGWL VIYGREAQGK DDKDANLVPV QKDEKVKTDK VESVGLTTRP PARYNEATLL SAMEGAGKLV DDDALREAMA GKGLGTPATR AAIIEGLLAE KYLVREGREL IPTAKAFQLM TLLRGLGVEE LTQAELTGEW EHKLSQIERG RLKRDEFMRE IAQMTQQIVK RAKEYDNDTI PGDYATLDTP CPQCGGQVKE NYRRFACTAC EFSISKIPGG RQFEIEEVEE LLLKKEIGPL QGFRSKMGRP FAAILKLAKD DDGNWKMEFD FGQNDDEGDG EPVDFSEQTP VGKCPKCGGS VYEHGMKYVC ENAVGSAKSC DFTSGKIILQ QEISREQIGK LLTDGKTDLL TGFKSSRTGR NFKAFLVKQP DGKIGFEFEA REPKAGAAAK TAKPAAKSAA KAESAPAKVA AKKAPAAKKA ATKTATKTAA TKTAAAKKTR ATTKQTAEAE E
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