Gene Rmet_3508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3508 
Symbol 
ID4040356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3797971 
End bp3798933 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content65% 
IMG OID637978925 
Producthypothetical protein 
Protein accessionYP_585649 
Protein GI94312439 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.231435 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGCTG CAGTGGGTAC GCTCGCCACG GTTGGTTTGA CGGCGTCGGC TTTCGCGCAA 
TCCAACTATC CAAACAAGCC GATCCGCCTG GTTGTGCCAT TCGCCGCGGG TGGCTCGACG
GATCTGTCGG CGCGCCTGGT AGCGGAGTTC GCAGGGCGTG AGCTGGGGCA GACCATCGTC
GTCGACAACA AGGGCGGGGC GGGTGGTTCG ATCGGCATGG AGCAGGTGGC TCGTGCCACG
CCGGACGGCT ACACGATCGG CATGGCCACG GTCAGCACGC ACGGGTCCAA CCCGGCGGTC
TATCCGAAGC TCGGCTATGA CCCGATCAAG GACTTCGCCC CGGTGACCAA CGTGGTAGCG
ATTCCGAGTG TGTTCGCCGT GCATCCGAGC GTGCCCGCCA AGACGATGCA GGAGTTCATC
GCCCTGGCGA AGGCGCACCC GGGCAAGTAC ACGTTCGCAT CGCCGGGCGC GGGGTCGCTG
GGTCACGTGA ACATCGAGAA CTTCATGATG CTGGCCAAGA TCGATCTGCT GCATGTGCCG
TACAAGGGCG CGGGTCTGGC GCTCAACGAT GCGGTGGCGG GGCAGGTCAA TGCGATCACG
GACAACCTGT CGTCGACGCT GCCCCACGTG AAAGCGGGCC GACTGCGTGC GCTGGCGGTG
CTCGGCACGC AGCGTTCGGC ACAGTTGCCC AATGTGCCGA CCTATGCCGA ACTCGGTTTC
AAGGACATGG GCGAGGGCGG CTGGTTCGGC ATCGTTGCGC CCGCCGGCAC GCCCCAGCCG
GTGATCGACA AGCTGAATGC CGCGATCCAC AAGGCCATGC AGAACCCCGA ATTCAAGCGG
AAGGTGGAGG AGTCGGGTGG CACGCTGGTG CCGACGACGC CTGATCAGTT CAAGGCACAG
ATCCAGCAAT CGATCGCCCG CTACGCGCGT GTGGTCAAGG CCGCCAACAT CAAGCTGGAC
TAA
 
Protein sequence
MSAAVGTLAT VGLTASAFAQ SNYPNKPIRL VVPFAAGGST DLSARLVAEF AGRELGQTIV 
VDNKGGAGGS IGMEQVARAT PDGYTIGMAT VSTHGSNPAV YPKLGYDPIK DFAPVTNVVA
IPSVFAVHPS VPAKTMQEFI ALAKAHPGKY TFASPGAGSL GHVNIENFMM LAKIDLLHVP
YKGAGLALND AVAGQVNAIT DNLSSTLPHV KAGRLRALAV LGTQRSAQLP NVPTYAELGF
KDMGEGGWFG IVAPAGTPQP VIDKLNAAIH KAMQNPEFKR KVEESGGTLV PTTPDQFKAQ
IQQSIARYAR VVKAANIKLD