| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3491 |
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| Symbol | hemE |
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| ID | 4040339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3781514 |
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| End bp | 3782617 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637978908 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_585632 |
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| Protein GI | 94312422 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000153179 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.770244 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGCAT TGCAGAACGA CACCTTCCTG CGGGCGCTGC GCCGGCAACC CACTGAATAC
ACACCCCTCT GGCTCATGCG CCAGGCGGGT CGCTACCTGC CCGAGTACAA CGCCACGCGC
GCGCGCGCCG GCAGCTTCCT CGGCCTGGCC AAGAACCCGG CCTACGCCAC CGAGGTGACG
CTGCAGCCGC TCGACCGCTA CCCGCTCGAC GCCGCGATCC TCTTCTCGGA CATCCTCACC
GTACCCGATG CGATGGGCCT CGGCCTGTCG TTCGCGCAGG GCGAGGGCCC GCGTTTTGCG
CATCCGTTGC GCACGGAAGC CGACGTGGCC AAGCTCGCGG TGCCGGACAT GGCGTCGCTG
CAATACGTGT TCGATGCGGT CAGCGAAATC CGCAAGGCGC TGGTGCAGGA CGGCCGTCAG
CGTGTGCCGC TGATCGGTTT CTCGGGCAGC CCGTGGACGC TGGCCTGCTA TATGGTCGAA
GGTGGTGGCT CGGACGACTT CCGCACCGTC AAGGCGATGA TGTACGCCCG GCCCGACCTG
ATGCATCGCA TTCTCGACAT CAATGCTACC GCCGTGTCCG CGTACCTCAA CGCGCAGATC
GAAGCCGGGG CCCAGGCCGT GATGGTTTTC GACACCTGGG GCGGCGCGCT GGCGGATGGC
ATGTATCAGG CCTTCTCGCT AGCGTACATG CGCAAGGTAC TTCAGGGCCT CAAGCGCGAG
CACGACGGCC AGCAGATCCC AGTGATCGTA TTCACCAAGG GCGGCGGCAT CTGGCTCGAG
GAAATCGCCG GGATCGGCCC GGATGCGATC GGGCTCGACT GGACCGTGAA CCTGGCGAAA
GCTCGCCGTC GGACCGAAGG CCGCGTGGCA CTGCAAGGCA ATATCGACCC GACCGTGCTG
TTCGCGTCCG AATCGGCCAT CCGCGAACAG GTACGGGGCG TGCTCGACTC TTACGCATCC
GCCGGTGGCA GCGATGGACA CGTCTTCAAC CTCGGCCACG GCATTTCGCA GTTCACGCCG
CCCGAGAACG TTTCGGTCCT GGTTGACGAA GTGCACAACC ATAGCCGCAA GCTGCGCGCC
GGGCAGGTTG CAGCGGCCGT CTGA
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| Protein sequence | MTALQNDTFL RALRRQPTEY TPLWLMRQAG RYLPEYNATR ARAGSFLGLA KNPAYATEVT
LQPLDRYPLD AAILFSDILT VPDAMGLGLS FAQGEGPRFA HPLRTEADVA KLAVPDMASL
QYVFDAVSEI RKALVQDGRQ RVPLIGFSGS PWTLACYMVE GGGSDDFRTV KAMMYARPDL
MHRILDINAT AVSAYLNAQI EAGAQAVMVF DTWGGALADG MYQAFSLAYM RKVLQGLKRE
HDGQQIPVIV FTKGGGIWLE EIAGIGPDAI GLDWTVNLAK ARRRTEGRVA LQGNIDPTVL
FASESAIREQ VRGVLDSYAS AGGSDGHVFN LGHGISQFTP PENVSVLVDE VHNHSRKLRA
GQVAAAV
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