Gene Rmet_3476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3476 
Symbol 
ID4040322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3756167 
End bp3757480 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content68% 
IMG OID637978893 
Productperiplasmic sensor signal transduction histidine kinase 
Protein accessionYP_585617 
Protein GI94312407 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCGC AGATGCCGCC ATCGGCGGAC GATCCACCGA TCGTGCGGCC CGAATTGCGT 
TCCAGCGCAT CGGAGACGCC CCGAAGGCGC TTCGATTCGA TGTTCGTGCG GCTGTTCTTC
GTGATGGCCG CGATCATGCT TGCTGTTCAC GTGCTGGGCG TGACCGTGAT CGAGGGGTTC
TTCCCGCGCC CGGGTTCGGA GCGCTACATG GAACGGATGC GCCGCGCCGC CTCGGAAGCC
GAGGCGGCCG GCCACTCATT GCCTGCACCA CTGCCGGGCG CGTTAGCATC GCTCAGCCAT
CCGCACGGGC CGCCACCACC GCCCAATGAT GACGATGACG ACGGCGACAA CGACGGGCCC
CCGCTGCATC CCGACGCATT CCGCATGCAG AAAGGCGGCG TACTCATGCC GCCCGGACCA
CCTGGGCCAC CTGGGCCACC GTCCGGTTTC CATATTCGAG GTCTCTGGCC GCCGCACTTG
GGCATGTTGT TCCAGCTCGT GGCCATCCTG ATTGCATCGT GGGTTGGCGC GCGTCTGCTG
GCGCGGCCCG TGCAGCAACT GGCCAGTGGC GCGAACCGGC TGGCGCAGGA CGTCCACGCG
CCGCCGCTGG AGGAGGAGAT GGGCCCAGCC GAAGCGCGTG ACGCTACCCG GGCACTGAAC
CTGATGCAGC AGCGCATCCG CACCCAGCTG GCGCAGCAAT CACGCTTCCT GGCGGCGGTG
TCGCACGATC TGCGCACGCC GCTGACGCGC ATGAGCCTGC GCATCGAGCG CATCGAGGAC
AACAACGTGC GCTACCGTCT GCGCCAGGAT CTGGCCGAGA TGAACGGACT GATCGACGCC
ACGCTGTACT ACCTGCGCGA GCGAGACGAT GCCGCCGGCC CGCGCCAGCG CGTGGACGTG
CTGGCACTGC TGCAGGCGAT CGTCGACGAT GCCCAGGAAA TGGGCCAGGA CGTGCGGCTT
TCCGGCACCG CCGTGCCGCT GCTGGCGTAC CCGGCCGAAC TGCGCCGCGC GGTAGTCAAT
CTGGTGGAGA ACGCGCACCG GTACGGCGGC GCCGCCCATA TCGTGCTGAC CGACAGCGCC
GAGCGCGTGA TCATCGACGT GTCCGATAAC GGCCCGGGTA TTCCGCCCGC GGAACTCCAG
CGCGTGCTGG AGCCGTTCTA TCGCGTGGAG TCGTCGCGCA GCCGTGCCAC AGGCGGTGTG
GGAATGGGGT TGGCGATCGC CGCCGATATC GTGGCGCGAC ACGGCGGGGA ACTCACGCTG
AGCAACCGTA CCGAGGGCGG CCTGCGCGTG CGCATTGTGC TGCCGCGCGC CTGA
 
Protein sequence
MAAQMPPSAD DPPIVRPELR SSASETPRRR FDSMFVRLFF VMAAIMLAVH VLGVTVIEGF 
FPRPGSERYM ERMRRAASEA EAAGHSLPAP LPGALASLSH PHGPPPPPND DDDDGDNDGP
PLHPDAFRMQ KGGVLMPPGP PGPPGPPSGF HIRGLWPPHL GMLFQLVAIL IASWVGARLL
ARPVQQLASG ANRLAQDVHA PPLEEEMGPA EARDATRALN LMQQRIRTQL AQQSRFLAAV
SHDLRTPLTR MSLRIERIED NNVRYRLRQD LAEMNGLIDA TLYYLRERDD AAGPRQRVDV
LALLQAIVDD AQEMGQDVRL SGTAVPLLAY PAELRRAVVN LVENAHRYGG AAHIVLTDSA
ERVIIDVSDN GPGIPPAELQ RVLEPFYRVE SSRSRATGGV GMGLAIAADI VARHGGELTL
SNRTEGGLRV RIVLPRA