| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3474 |
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| Symbol | |
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| ID | 4040320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3753227 |
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| End bp | 3754729 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637978891 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_585615 |
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| Protein GI | 94312405 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCCC CCATGTCCGA CACCCCCGAT ACCGCTATTC CTTCCGGCCT CGCATCCTCG
TCTACCGCCT TCGACCGCAC CGCACTCGCC GACTTCCGCG AACTTGCCGG CCGCATCGAT
GGCAACGGCC CGCGCTACAC GTCGTATCCC ACCGCCGATC GCTTTCACGG TGAAGTCGGC
GACGCCGCCT ACCGGCGCGC CCTGGATGCC TGCCGTGCGA ACGTACCGGC ACCGCTGTCG
CTGTACGTCC ACATCCCGTT CTGCGAGAAC ATCTGCTACT ACTGCGGCTG CAACAAGATC
ATCACCAAGG ATCACACCCG CAGCGCGCGT TACGTCGACT ATCTGGCACG CGAAATGGCC
ATGGCCGCCG AGCAGCTTGG CGAGCGCCGC GCGGTCATGC AGTCGCATTG GGGCGGCGGC
ACGCCGACGT TCCTCGATCC TGTTGAAATG CGCCACGTGA TGTCGGCGTT GCATAAGCAT
TTCGAGCTGC TGCCTGAGGG AGAGCACGCG ATCGAGATCG ACCCGCGCCG TGTGGGCGAC
GATCGCATGG AACTGCTCGG CGAACTTGGC TTCAACCGGA TCAGCCTTGG CGTGCAGGAC
TTCGATCCCG AAGTGCAGCA GGCCATCCAC CGGGTGCAGT CATATGAGGA AACCAACGGC
GTGGTGCGGG CCGCGCGACG CCTCGGGTTC CGTTCGATCA GCATGGACCT GATCTACGGA
CTGCCGCACC AGACCACGCA ACGCTTCTCG GCAACCATCG ACCGCGTGCT GGAAATGCGC
CCGGACCGCC TGTCGGTCTA CAGCTACGCG CACCTCCCGC ATGTGTTCAA ACCGCAACGC
CGCATCGATC CCGCCGCATT GCCACCTGCC GCGGAAAAAC TCGACATCCT CGTTTCGACG
ATCGAGCGCC TGACCGCTGC TGGCTATGTC TATATCGGCA TGGACCATTT CGCGTTGCCG
AATGACGATC TGGCCATCGC CCAGCGCGAA GGTCGGCTGC AACGCAATTT CCAGGGCTAT
GCCACCCACG CGGGCTACGA CCAGCTTGGC TTCGGCGTCT CGGCGATCGG CGCTGTGGCG
GGCCACTACG CGCAGAACGC GCGCACCACG GACGAGTACT ACGCCGCGCT CGACAAAGGC
CAACTGCCGA TCGTGCGCGG GTTCGAGACC TCGGAAGACG ACCGCCTGCG CAAGTTCATC
ATCGGCGAAC TGATGTGCAA CGGCACGCTC GATATTCCTG CCGTGGAAGC CTCGTACAGC
ATCAATTTCG CGCAGAAATT CGCCGCCGAA CTGGTCGACC TCGACAAGCT GGCCCTGGAC
CATCTGCTTC GGCGCACACG GAACCGGATC GAGATCACGC CGCTGGGTCG ACTGCTGGTG
CGTCGCATCG CGATGGTGTT CGATCACTAT CTGCGTGAAG ACGCGCTGCG TCCCAAGCCG
GCAGCGCCGG CGGCCAACGA CGCGAAGGTC ATCCCGCTGG TGCGCTACTC ACGCGTCGTT
TAA
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| Protein sequence | MSAPMSDTPD TAIPSGLASS STAFDRTALA DFRELAGRID GNGPRYTSYP TADRFHGEVG
DAAYRRALDA CRANVPAPLS LYVHIPFCEN ICYYCGCNKI ITKDHTRSAR YVDYLAREMA
MAAEQLGERR AVMQSHWGGG TPTFLDPVEM RHVMSALHKH FELLPEGEHA IEIDPRRVGD
DRMELLGELG FNRISLGVQD FDPEVQQAIH RVQSYEETNG VVRAARRLGF RSISMDLIYG
LPHQTTQRFS ATIDRVLEMR PDRLSVYSYA HLPHVFKPQR RIDPAALPPA AEKLDILVST
IERLTAAGYV YIGMDHFALP NDDLAIAQRE GRLQRNFQGY ATHAGYDQLG FGVSAIGAVA
GHYAQNARTT DEYYAALDKG QLPIVRGFET SEDDRLRKFI IGELMCNGTL DIPAVEASYS
INFAQKFAAE LVDLDKLALD HLLRRTRNRI EITPLGRLLV RRIAMVFDHY LREDALRPKP
AAPAANDAKV IPLVRYSRVV
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