| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3394 |
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| Symbol | |
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| ID | 4040238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 3669298 |
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| End bp | 3670515 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637978809 |
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| Product | general secretion pathway protein F |
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| Protein accession | YP_585535 |
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| Protein GI | 94312325 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.955056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCCT ATCGCTATGA AGCCGCCGAC GCCGCCGGCC GTGCAGATCG CGGCGTCATC
GAGGCCGACA GCCCAAAGCA GGCGCGCGCG CAACTTCGCG CACGCGGACT GACGCCGATC
ATCGTTGACC CGCTAGCCGG CGCTGGGCTG GCCAAGCGCA GCGGCAGCAG CGCGTTCGTG
CGCCGGCTGT CGACGCAGGA GCAGGCGCTG TTCACGCGCC AGCTCGCCAG CCTGATCGTG
TCGGGCCTGC CGCTCGACGA AGCCCTGGGC GCGCTTGCCG ATCAAGCCGA ACGCCAGTAC
GTGCATGAGC TCCTTGCGGG CATCCGCGCC GAAGTCATGG GCGGCAGCTC GCTCTCCGTG
GCGCTGGCCC AGCACCCCAA GGATTTTCCG GACATCTACC GTGCGCTGGT TTCTGCCGGC
GAGCATTCGG GCCATCTCGG CATGGTGCTC GAACGGTTGG CCACCTACAT CGAGACGCGC
AACACGCTGA CGTCGAAGAT CCGGCTCGCG TTCACGTACC CAGCCATCGT CACGGTGGTG
GCGTTCGCGA TCGTGATCTT CCTGCTGTCG TATGTGGTGC CGCAGGTGGT CAGCGTGTTT
GCCAACACCA AGCAGAAGCT GCCCACGCTG ACCGTGATCA TGCTGGCGCT GTCAGATTTC
GTGCGCAACT GGTGGTGGGC CGCGCTGGGT GTCATCGCCG CGGTCGTGGC AATCATTCGC
AGCCTGCTGA AGCAGCCCGA CGTTCGTCTG GCATGGCACC GCTGGCTACT GACCGCGCCG
CTGGTCGGCA AGCTGATTCG CGGGTACAAC ACGGCGCGCT TCGCCAGCAC GCTGTCGATT
CTCGTATCGG CCGGCGTGCC GATCCTGCGC AGCCTGCAAG CCGCCGGAGA AACACTGACC
AATCAGGCGC TCAAGGCCAA CGTCGAAGAC GCCACCACGC GCGTGCGCGA AGGCGCATCG
CTGGCGCGCG CGCTGGCTGC CCAGAACCAG TTTCCTCCGG TGTTGGTGCA CCTGATCCGG
TCCGGCGAGG CCACCGGCAA CCTGCCGACG ATGCTCGACC GCGCAGCCAC CGGCGAAGGC
CAGGAACTGG AGCGCCGTAC GCTGTTCCTG ACCAGCCTGC TTGAGCCACT GCTGATTCTG
ACGATGGGTG TGGTGGTGCT GATGATCGTG CTGGCCGTGC TAATGCCGAT CATCGAGATC
AATCAGCTGG TCAGATAG
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| Protein sequence | MPAYRYEAAD AAGRADRGVI EADSPKQARA QLRARGLTPI IVDPLAGAGL AKRSGSSAFV
RRLSTQEQAL FTRQLASLIV SGLPLDEALG ALADQAERQY VHELLAGIRA EVMGGSSLSV
ALAQHPKDFP DIYRALVSAG EHSGHLGMVL ERLATYIETR NTLTSKIRLA FTYPAIVTVV
AFAIVIFLLS YVVPQVVSVF ANTKQKLPTL TVIMLALSDF VRNWWWAALG VIAAVVAIIR
SLLKQPDVRL AWHRWLLTAP LVGKLIRGYN TARFASTLSI LVSAGVPILR SLQAAGETLT
NQALKANVED ATTRVREGAS LARALAAQNQ FPPVLVHLIR SGEATGNLPT MLDRAATGEG
QELERRTLFL TSLLEPLLIL TMGVVVLMIV LAVLMPIIEI NQLVR
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