Gene Rmet_3324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3324 
Symbol 
ID4040159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3587170 
End bp3588360 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content61% 
IMG OID637978730 
Productelongation factor Tu 
Protein accessionYP_585465 
Protein GI94312255 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGG AAAAGTTCGA GCGGACCAAG CCGCACGTGA ACGTAGGTAC GATTGGTCAC 
GTTGACCACG GCAAGACGAC GCTGACGGCA GCGATTGCCA CGGTGCTGGC AGCCAAGTTC
GGTGGCGCAG CCAAGAAGTA CGACGAAATC GACGCAGCGC CGGAAGAGAA GGCACGCGGC
ATCACGATCA ACACCGCGCA CGTGGAATAC GAGACGGCCA ACCGTCACTA CGCCCACGTT
GACTGCCCGG GCCACGCTGA CTATGTGAAG AACATGATCA CGGGCGCTGC GCAGATGGAC
GGCGCGATTC TGGTGTGCTC GGCCGCTGAC GGCCCGATGC CGCAGACGCG TGAGCACATC
CTGCTGGCCC GTCAGGTTGG CGTGCCGTAC ATCATCGTGT TCCTGAACAA GTGCGACATG
GTGGACGACG CCGAGCTGCT CGAGCTGGTG GAAATGGAAG TGCGCGAGCT GCTGTCGAAG
TACGAATTCC CGGGCGACGA CACGCCGATC ATCAAGGGTT CGGCCAAGCT GGCGCTGGAA
GGCGACAAGG GCGAACTGGG TGAAGTGGCG ATCATGAACC TGGCCGACGC GCTGGACACG
TACATCCCGA CGCCGGAGCG CGCTGTGGAC GGTACGTTCC TGATGCCGGT GGAAGACGTG
TTCTCGATCT CGGGCCGCGG TACCGTGGTG ACCGGTCGTA TCGAGCGTGG CGTGATCAAG
GTCGGTGAAG AAATCGAAAT CGTGGGTATC CGCCCGACGG TGAAGACGAC TTGCACGGGC
GTGGAAATGT TCCGCAAGCT GCTGGATCAA GGCCAGGCTG GTGACAACGT TGGTCTGCTG
CTGCGCGGCA CGAAGCGCGA AGACGTGGAG CGTGGTCAAG TTCTGTGCAA GCCGGGCTCG
ATCAAGCCGC ACACGCACTT CACGGGTGAG GTGTACATTC TGTCGAAGGA CGAAGGTGGT
CGTCACACGC CGTTCTTCAA CAACTACCGC CCGCAGTTCT ATTTCCGTAC GACCGACGTG
ACCGGCTCGA TCGAGCTGCC GCAGGACAAG GAAATGGTGA TGCCGGGTGA CAACGTGTCG
ATCACCGTCA AGCTGATCGC CCCGATCGCC ATGGAAGAAG GTCTGCGCTT CGCTATCCGC
GAAGGTGGCC GTACCGTCGG CGCCGGCGTT GTGGCAAAGA TCCTCGACTA A
 
Protein sequence
MAKEKFERTK PHVNVGTIGH VDHGKTTLTA AIATVLAAKF GGAAKKYDEI DAAPEEKARG 
ITINTAHVEY ETANRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI
LLARQVGVPY IIVFLNKCDM VDDAELLELV EMEVRELLSK YEFPGDDTPI IKGSAKLALE
GDKGELGEVA IMNLADALDT YIPTPERAVD GTFLMPVEDV FSISGRGTVV TGRIERGVIK
VGEEIEIVGI RPTVKTTCTG VEMFRKLLDQ GQAGDNVGLL LRGTKREDVE RGQVLCKPGS
IKPHTHFTGE VYILSKDEGG RHTPFFNNYR PQFYFRTTDV TGSIELPQDK EMVMPGDNVS
ITVKLIAPIA MEEGLRFAIR EGGRTVGAGV VAKILD