| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3292 |
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| Symbol | rpsD |
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| ID | 4040127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3568545 |
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| End bp | 3569168 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637978698 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_585433 |
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| Protein GI | 94312223 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCACGTT ATATCGGCCC GAAGGCCAAA CTCTCCCGCC GCGAAGGCAC AGATCTGTTC
CTGAAGAGCG CACGCCGCTC GCTGGCCGAC AAGTGCAAGC TGGACAGCAA GCCGGGCCAA
CACGGCCGCA CCTCGGGCGC TCGTACGTCC GACTACGGCA ACCAGCTCCG CGAAAAGCAG
AAGGTCAAGC GTATTTACGG CGTGCTCGAG CGTCAGTTCC GCCGTTACTT CGCCGAAGCC
GATCGCCGCA AGGGCAACAC TGGTGAAAAC CTGCTGCAAC TGCTGGAATC GCGTCTGGAC
AACGTGGTGT ACCGCATGGG CTTCGGCTCG ACCCGCGCTG AAGCGCGTCA GCTGGTGTCG
CACAAGGCGA TCCTGGTGAA CGGTGAGACG CTGAATGTCC CGTCGGCCCA GATCAAGTCG
GGCGATATCG TGTCGGTGCG CGAGCAGTCG AAGAAGCAAG TGCGTATCGC CGAAGCACTG
TCGCTGGCCG AGCAGTCGGG CTTCCCGACC TGGGTTGCTG TGGACGCCAA GAAGTTCGAA
GGCACGTACA AGCAAGCCCC GGATCGCGCC GACATCTCGG GCGACATCAA CGAAAGCCTG
ATCGTCGAAT TGTATTCGCG TTAA
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| Protein sequence | MARYIGPKAK LSRREGTDLF LKSARRSLAD KCKLDSKPGQ HGRTSGARTS DYGNQLREKQ
KVKRIYGVLE RQFRRYFAEA DRRKGNTGEN LLQLLESRLD NVVYRMGFGS TRAEARQLVS
HKAILVNGET LNVPSAQIKS GDIVSVREQS KKQVRIAEAL SLAEQSGFPT WVAVDAKKFE
GTYKQAPDRA DISGDINESL IVELYSR
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