| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3245 |
|---|
| Symbol | |
|---|
| ID | 4040080 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 3517544 |
|---|
| End bp | 3518167 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637978651 |
|---|
| Product | multiple antibiotic resistance (MarC)-related proteins |
|---|
| Protein accession | YP_585386 |
|---|
| Protein GI | 94312176 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2095] Multiple antibiotic transporter |
|---|
| TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATACGC TCAAGTCCTT CATCTCGCTG CTGGCGCTGA TCAATCCGAT CGGGGCGATC
CCGTTCTTCA TCAGCCTGAC CAGCCAGCAG ACCGAGGCGG AAAAGCTGCG GACCATCAAG
ACGGCATCGG TATCGGTGGC GATCGTGGTG GGGGTCTCGG CGTTGCTCGG CCAGCAGATC
ATCGAGTTCT TCAATATCTC GGTGGCCTCG CTGGAAGTGG GTGGCGGCTT GCTAATGGTC
ATGATGGCCA TGAACATGCT GAACGCGCAG ACCAGTCGTA CCAAGGCCAC GCCGGAGGAA
GAGAATGAGG CCGAAGCCAA GGCCAGTATC GCGGTGGTGC CGCTGGCGCT GCCGCTGCTG
ACCGGGCCGG GGTCGATCAG TACCGTGATC GTCTATGCGG GCAAGACGCA GCACTGGTAC
CAGTTGCTGA TCCTGGTTGG CATTGGCGTG TTGCTTGGCG CTGTGGTGTA TGTGACGTTC
CGCGCGGCTG ACCCCATCGC GCGGGTGATC GGACAGACCG GGATCAATAT TGGCACGCGC
CTGATGGGTC TAATACTCTC GGCGCTGGCC GTTGAATTCA TTGTGGACGG GCTGAAGACA
TTGTTGCCTG TTTTGAAATC ATGA
|
|---|
| Protein sequence | MDTLKSFISL LALINPIGAI PFFISLTSQQ TEAEKLRTIK TASVSVAIVV GVSALLGQQI
IEFFNISVAS LEVGGGLLMV MMAMNMLNAQ TSRTKATPEE ENEAEAKASI AVVPLALPLL
TGPGSISTVI VYAGKTQHWY QLLILVGIGV LLGAVVYVTF RAADPIARVI GQTGINIGTR
LMGLILSALA VEFIVDGLKT LLPVLKS
|
|---|
| |