| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3242 |
|---|
| Symbol | |
|---|
| ID | 4040077 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 3515139 |
|---|
| End bp | 3515909 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637978648 |
|---|
| Product | imidazole glycerol phosphate synthase subunit HisF |
|---|
| Protein accession | YP_585383 |
|---|
| Protein GI | 94312173 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGCCA AACGTATCAT CCCCTGCCTG GACGTGACCA ATGGGCGGGT GGTCAAGGGT
GTCAATTTCG TCGAGCTGCG CGACGCGGGC GATCCCGTCG AGATCGCGCG GCGCTACGAC
GAGCAGGGTG CTGATGAAAT CACATTTCTC GACATCACGG CAACCAGCGA CGGCCGCGAC
CTGATCCTGC ACATCATCGA GGCGGTGGCG TCGCAGGTGT TCATACCGCT GACCGTCGGG
GGTGGCGTGC GCACTGTGGA AGATGTGCGG CGACTGCTGA ATGCAGGCGC AGACAAGATC
AGCGTGAACT CGTCGGCCAT CGCCAATCCG CAGCTCGTGT CCGACGCAAC GGGCAAGTAC
GGCTCGCAGT GCATCGTTGT GGCCATCGAC GCCAAGCGCA GCTCCGCGCC CGGCGAACCG
CCGCGCTGGG AAGTGTTCAC TCACGGCGGC CGCAAGGCCA CCGGACTCGA TGCGGTGGAG
TGGGCCCGCG AGATGGCACG GCGCGGCGCG GGCGAGATTC TGCTGACCAG CATGGATCGC
GATGGCACGA AGAGCGGGTT CGACCTCGAA CTCACGCGTG CTGTCAGCGA CGCGGTGCCC
GTGCCCGTTA TTGCATCTGG CGGGGTCGGT GGCCTGCAGG ATCTGGCCGA TGGCATCCGC
CTGGGACACG CCGACGCCGT ACTGGCCGCC AGCATCTTCC ACTATGGCGA GCACACCGTT
GGTGAGGCAA AGGCTTTCAT GGCCCGCGAG GGCATTCCCG TCCGGATGTG A
|
|---|
| Protein sequence | MLAKRIIPCL DVTNGRVVKG VNFVELRDAG DPVEIARRYD EQGADEITFL DITATSDGRD
LILHIIEAVA SQVFIPLTVG GGVRTVEDVR RLLNAGADKI SVNSSAIANP QLVSDATGKY
GSQCIVVAID AKRSSAPGEP PRWEVFTHGG RKATGLDAVE WAREMARRGA GEILLTSMDR
DGTKSGFDLE LTRAVSDAVP VPVIASGGVG GLQDLADGIR LGHADAVLAA SIFHYGEHTV
GEAKAFMARE GIPVRM
|
|---|
| |