Gene Rmet_3234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3234 
Symbol 
ID4040069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3510309 
End bp3511514 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content61% 
IMG OID637978640 
Productporin 
Protein accessionYP_585375 
Protein GI94312165 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGCC CAAACACTTG GGCAACCAAG ATTTCCCAAT CAGTTGACAA GGAAAGTGTC 
GATATGAAGA TGAAACTGTT TGCTGCTGCC GTCGCCGCTC TGGCCGCTGG TGGCGCCTAT
GCCCAGTCGA GCGTGACCCT GTACGGTGTG GTTGACGCTG GCGTCGAGTA CGCTAACCAC
CAGCCGGGCG TGTCCGGTAG CCACGACGTC GTGCGCCTGA ACTCGGGCGG CATGTCGGGC
AGCCGTTGGG GCCTGCGTGG CGTTGAAGAC CTGGGCGGTG GCCTGAAGGG CGTTTTCGTG
CTGGAAAGCG GTTTCAACGT TGACACCGGT ACGTCGGGCC AAAACAACCG TCTGTTCGGT
CGTCAAGCCT TCGTCGGTAT GCAAAGCCAG TTCGGCACGC TGACCCTGGG TCGCCACCAG
ACGCCGTTCT ATGACTTCGG TCTGGCCTTC GACCCGATGG CCATCTCGCC GAACTACTCG
ATCACGGCTC AAGCTCCGGA ATTCCAGCAA CGTGCTGACA ACTCGATCAA GTACATCGGT
ACGTTCGGTG GCCTGACCGG CTCGCTGCTG TACAGCACCG GCTCGAACAC GGCTGGCACG
GCTAGCGTCT ACCAAGGTAT CAGCGGCGAA GTTCCGGGTA ACTACCACCT GGGCCGCGAG
ATGAGCGCAA GCGTGATGTA CAACGGTGGC CCGTTCTCCG TTGGCGCCAT CTATGACGAA
ACCAACGTTG GTATCGCTGC TGCTGACGGC GCCAAGATCC GCCGCACGTC GATCGCTGGT
ACGTACGCCT TCGGCCCGGC CAAGGTGTTC GCTGGCTACC GTTACGCTCA CGCTCAAGGC
GGCGCAGTTC TGCCGGGTGG TGTGAACACC GTTGACGGCG CTGCGAAGAT TGCGAACGTC
TCGAACCTGT ACTGGCTGGG CATGGGTTAC CAGCTGACCC CGGCTCTGTC GCTGACCGGC
GCCGCGTACT ACCAAGACTT CCGCAACACC GGTGCTGATC CGTGGAGCTT CGTTGTGTCG
ACGGACTACG CTTTCTCGAA GCGTACGGAC GCCTACTTCA ACGTGGCCTA CACGAAGAAC
AAGGACGGCT CGACTCTGGG CACGTCGTCG GCTAGCCCGG GCAGCCTCGG TGGCTCCGGC
TTCGGCACGA CTCTGGGTTC GTACAACCAG TTCGGCGCCA TGGTTGGCCT GCGCCACAAG
TTCTAA
 
Protein sequence
MRRPNTWATK ISQSVDKESV DMKMKLFAAA VAALAAGGAY AQSSVTLYGV VDAGVEYANH 
QPGVSGSHDV VRLNSGGMSG SRWGLRGVED LGGGLKGVFV LESGFNVDTG TSGQNNRLFG
RQAFVGMQSQ FGTLTLGRHQ TPFYDFGLAF DPMAISPNYS ITAQAPEFQQ RADNSIKYIG
TFGGLTGSLL YSTGSNTAGT ASVYQGISGE VPGNYHLGRE MSASVMYNGG PFSVGAIYDE
TNVGIAAADG AKIRRTSIAG TYAFGPAKVF AGYRYAHAQG GAVLPGGVNT VDGAAKIANV
SNLYWLGMGY QLTPALSLTG AAYYQDFRNT GADPWSFVVS TDYAFSKRTD AYFNVAYTKN
KDGSTLGTSS ASPGSLGGSG FGTTLGSYNQ FGAMVGLRHK F