Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3234 |
Symbol | |
ID | 4040069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 3510309 |
End bp | 3511514 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637978640 |
Product | porin |
Protein accession | YP_585375 |
Protein GI | 94312165 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCGCC CAAACACTTG GGCAACCAAG ATTTCCCAAT CAGTTGACAA GGAAAGTGTC GATATGAAGA TGAAACTGTT TGCTGCTGCC GTCGCCGCTC TGGCCGCTGG TGGCGCCTAT GCCCAGTCGA GCGTGACCCT GTACGGTGTG GTTGACGCTG GCGTCGAGTA CGCTAACCAC CAGCCGGGCG TGTCCGGTAG CCACGACGTC GTGCGCCTGA ACTCGGGCGG CATGTCGGGC AGCCGTTGGG GCCTGCGTGG CGTTGAAGAC CTGGGCGGTG GCCTGAAGGG CGTTTTCGTG CTGGAAAGCG GTTTCAACGT TGACACCGGT ACGTCGGGCC AAAACAACCG TCTGTTCGGT CGTCAAGCCT TCGTCGGTAT GCAAAGCCAG TTCGGCACGC TGACCCTGGG TCGCCACCAG ACGCCGTTCT ATGACTTCGG TCTGGCCTTC GACCCGATGG CCATCTCGCC GAACTACTCG ATCACGGCTC AAGCTCCGGA ATTCCAGCAA CGTGCTGACA ACTCGATCAA GTACATCGGT ACGTTCGGTG GCCTGACCGG CTCGCTGCTG TACAGCACCG GCTCGAACAC GGCTGGCACG GCTAGCGTCT ACCAAGGTAT CAGCGGCGAA GTTCCGGGTA ACTACCACCT GGGCCGCGAG ATGAGCGCAA GCGTGATGTA CAACGGTGGC CCGTTCTCCG TTGGCGCCAT CTATGACGAA ACCAACGTTG GTATCGCTGC TGCTGACGGC GCCAAGATCC GCCGCACGTC GATCGCTGGT ACGTACGCCT TCGGCCCGGC CAAGGTGTTC GCTGGCTACC GTTACGCTCA CGCTCAAGGC GGCGCAGTTC TGCCGGGTGG TGTGAACACC GTTGACGGCG CTGCGAAGAT TGCGAACGTC TCGAACCTGT ACTGGCTGGG CATGGGTTAC CAGCTGACCC CGGCTCTGTC GCTGACCGGC GCCGCGTACT ACCAAGACTT CCGCAACACC GGTGCTGATC CGTGGAGCTT CGTTGTGTCG ACGGACTACG CTTTCTCGAA GCGTACGGAC GCCTACTTCA ACGTGGCCTA CACGAAGAAC AAGGACGGCT CGACTCTGGG CACGTCGTCG GCTAGCCCGG GCAGCCTCGG TGGCTCCGGC TTCGGCACGA CTCTGGGTTC GTACAACCAG TTCGGCGCCA TGGTTGGCCT GCGCCACAAG TTCTAA
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Protein sequence | MRRPNTWATK ISQSVDKESV DMKMKLFAAA VAALAAGGAY AQSSVTLYGV VDAGVEYANH QPGVSGSHDV VRLNSGGMSG SRWGLRGVED LGGGLKGVFV LESGFNVDTG TSGQNNRLFG RQAFVGMQSQ FGTLTLGRHQ TPFYDFGLAF DPMAISPNYS ITAQAPEFQQ RADNSIKYIG TFGGLTGSLL YSTGSNTAGT ASVYQGISGE VPGNYHLGRE MSASVMYNGG PFSVGAIYDE TNVGIAAADG AKIRRTSIAG TYAFGPAKVF AGYRYAHAQG GAVLPGGVNT VDGAAKIANV SNLYWLGMGY QLTPALSLTG AAYYQDFRNT GADPWSFVVS TDYAFSKRTD AYFNVAYTKN KDGSTLGTSS ASPGSLGGSG FGTTLGSYNQ FGAMVGLRHK F
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