Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3176 |
Symbol | |
ID | 4040010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 3448550 |
End bp | 3449350 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637978581 |
Product | ribulose-phosphate 3-epimerase |
Protein accession | YP_585317 |
Protein GI | 94312107 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGGGG CAAGCGGCCC GGCCAGGCGT TCGTCCCGAC TCCGGGGGCC CGACCGGCGT AAAATACCGC CCATTCCGCC TTCAGCCCGC CCGAATATCA TGAGCAGCCC CACCTTCCGC ATTGCCCCGT CCATCCTGTC CGCCGACTTT GCCCGCCTGG GCGAGGAAGT GCGCCGCGTC ACCGAAGCCG GCGCGGACTG GATCCATTTC GATGTGATGG ACAACCACTA CGTGCCCAAC CTGACCGTGG GGCCGCTGGT CTGCGAGGCG ATCCGCCCGC ACGTCACCGC CCCAATCGAC GTGCACCTGA TGGTACGTCC GGTGGATCGC ATCATCCCGG ACTTTGCCCG CGCCGGCGCC AACATCATCA CATTCCACCC CGAGGCCAGC GACCATATCG ACCGCTCGCT CGCGCTGATC CGCGACAACG GCTGCCAGGC CGGCCTGGTG TTCAACCCGG CCACGCCGTT GCACTACCTG GACCACGTGA TGGACCGCCT GGACGTGATC CTGCTGATGT CCGTGAACCC GGGATTCGGC GGCCAGTCTT TCATTCCCGA GACGCTGAAC AAGCTGCGCG CCGTGCGCCA GCGCATCGAC GCGTACACCG CGCGCACGGG CCGCCGGATC CTGCTGGAAG TGGACGGTGG CGTGAAGGTG GACAACATCG CCGAGATCGC CGCGGCGGGC GCGGATACGT TCGTGGCGGG CTCCGCCGTA TTCGGCAAGC CGGACGCCGA CGGCGGCTAC AAGGGCGTCA TCGGCGCGCT GCGGGCCGAA TTGGCCACGG TTGGCAAGTA A
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Protein sequence | MAGASGPARR SSRLRGPDRR KIPPIPPSAR PNIMSSPTFR IAPSILSADF ARLGEEVRRV TEAGADWIHF DVMDNHYVPN LTVGPLVCEA IRPHVTAPID VHLMVRPVDR IIPDFARAGA NIITFHPEAS DHIDRSLALI RDNGCQAGLV FNPATPLHYL DHVMDRLDVI LLMSVNPGFG GQSFIPETLN KLRAVRQRID AYTARTGRRI LLEVDGGVKV DNIAEIAAAG ADTFVAGSAV FGKPDADGGY KGVIGALRAE LATVGK
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