Gene Rmet_3176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3176 
Symbol 
ID4040010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3448550 
End bp3449350 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content68% 
IMG OID637978581 
Productribulose-phosphate 3-epimerase 
Protein accessionYP_585317 
Protein GI94312107 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGGG CAAGCGGCCC GGCCAGGCGT TCGTCCCGAC TCCGGGGGCC CGACCGGCGT 
AAAATACCGC CCATTCCGCC TTCAGCCCGC CCGAATATCA TGAGCAGCCC CACCTTCCGC
ATTGCCCCGT CCATCCTGTC CGCCGACTTT GCCCGCCTGG GCGAGGAAGT GCGCCGCGTC
ACCGAAGCCG GCGCGGACTG GATCCATTTC GATGTGATGG ACAACCACTA CGTGCCCAAC
CTGACCGTGG GGCCGCTGGT CTGCGAGGCG ATCCGCCCGC ACGTCACCGC CCCAATCGAC
GTGCACCTGA TGGTACGTCC GGTGGATCGC ATCATCCCGG ACTTTGCCCG CGCCGGCGCC
AACATCATCA CATTCCACCC CGAGGCCAGC GACCATATCG ACCGCTCGCT CGCGCTGATC
CGCGACAACG GCTGCCAGGC CGGCCTGGTG TTCAACCCGG CCACGCCGTT GCACTACCTG
GACCACGTGA TGGACCGCCT GGACGTGATC CTGCTGATGT CCGTGAACCC GGGATTCGGC
GGCCAGTCTT TCATTCCCGA GACGCTGAAC AAGCTGCGCG CCGTGCGCCA GCGCATCGAC
GCGTACACCG CGCGCACGGG CCGCCGGATC CTGCTGGAAG TGGACGGTGG CGTGAAGGTG
GACAACATCG CCGAGATCGC CGCGGCGGGC GCGGATACGT TCGTGGCGGG CTCCGCCGTA
TTCGGCAAGC CGGACGCCGA CGGCGGCTAC AAGGGCGTCA TCGGCGCGCT GCGGGCCGAA
TTGGCCACGG TTGGCAAGTA A
 
Protein sequence
MAGASGPARR SSRLRGPDRR KIPPIPPSAR PNIMSSPTFR IAPSILSADF ARLGEEVRRV 
TEAGADWIHF DVMDNHYVPN LTVGPLVCEA IRPHVTAPID VHLMVRPVDR IIPDFARAGA
NIITFHPEAS DHIDRSLALI RDNGCQAGLV FNPATPLHYL DHVMDRLDVI LLMSVNPGFG
GQSFIPETLN KLRAVRQRID AYTARTGRRI LLEVDGGVKV DNIAEIAAAG ADTFVAGSAV
FGKPDADGGY KGVIGALRAE LATVGK