Gene Rmet_3173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3173 
Symbol 
ID4040007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3446652 
End bp3447800 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content67% 
IMG OID637978578 
ProductMltA 
Protein accessionYP_585314 
Protein GI94312104 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2821] Membrane-bound lytic murein transglycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.647325 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAGA TGGCAAATCA GTATTCCCTG CGCGCCCCCC GCGCATCGTC GAGCAACACT 
TCCTGGCGCG GCTGGCTTGT CCTGACGGGC GCTGCCGCAC TGCTGGCCGG CTGCATGAGC
GGGCCGCCCC CGCGTATCGA AGGTCCGGGC GGCGTGCCGG GCGGGAAGGC GCCTGCTACC
TCATCCGCGG CAGGCCGGTT GCAACCGGCG AGCTGGGCGG AAATCGGTGG CTGGAGCCAG
GACGACGTGC GTGCCGCCTG GCCCGCGCTG CTGGCGAGCT GCCAGGCGCT GAAAAAGCGC
GCCGACTGGA ACCGCGTCTG CGCCGTCGGC CTGATGGTGG ACGCCGGCGA TCTCGAGGCG
ATGCGCGCGT ACTTCGAAAC CAACTTCCTG CCATACCGCG TGGTCAACGT CGATGGGACG
GACAACGGGT TGATCACCGG GTACTACGAA CCGATCCTGC ACGGCTCCCG CACGCGTCAG
GGTGCGTATC AGGTCCCGCT CTATCGCCGG CCGCCGCAAC TCGGCAAGGG CATGTTGCCG
CCGCGCGCCG AACTGCTGCA GAACCCGGCG ATGCGTGGCA GCGAACTGGT CTGGGTGGAT
GATCCGGTCG AAGCCGCGTT CCTGCAGATC CAGGGCTCCG GCCGCATCCG CATGGCCGAT
GGCACGATGA TGCGTGTCGG CTACGGCGGC ACCAATGACC AGCCGTTCCG CTCATTCGGC
AAATGGCTGC TCGACCGTGG CGAGATCACG CCGGCGCAGG CCACGATGCA GGGCATCAAG
GCATGGGCGC GTGCCAACCC GGGACGCGTG GACGAAATGC TCAACGTCAA TCCGCGCTTT
GTGTTCTTCC GCGAATTGCC GCCCACCAAC GAAGGACCGG TAGGCGCGCT GGGCGTGCCG
CTTACGGCGG AACGCTCGAT AGCAGTTGAT CCCGCAACCA TCCCGCTTGG CGTGCCGGTT
TTCCTGTCGA CCACACGGCC ACTTTCCTCC GAACCGATTC AACGTCTGAT GTTCGCGCAG
GACACGGGCT CCGCCATCAA GGGTGGCGTG CGCGCGGACT TCTTCTGGGG CGCAGGCGAC
GCCGCCGGCG AGACCGCCGG CCGCATGAAG CAGGGTGGCA GGATGTGGGT CCTGATGCCG
CGCAGCTGA
 
Protein sequence
MDKMANQYSL RAPRASSSNT SWRGWLVLTG AAALLAGCMS GPPPRIEGPG GVPGGKAPAT 
SSAAGRLQPA SWAEIGGWSQ DDVRAAWPAL LASCQALKKR ADWNRVCAVG LMVDAGDLEA
MRAYFETNFL PYRVVNVDGT DNGLITGYYE PILHGSRTRQ GAYQVPLYRR PPQLGKGMLP
PRAELLQNPA MRGSELVWVD DPVEAAFLQI QGSGRIRMAD GTMMRVGYGG TNDQPFRSFG
KWLLDRGEIT PAQATMQGIK AWARANPGRV DEMLNVNPRF VFFRELPPTN EGPVGALGVP
LTAERSIAVD PATIPLGVPV FLSTTRPLSS EPIQRLMFAQ DTGSAIKGGV RADFFWGAGD
AAGETAGRMK QGGRMWVLMP RS