| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3110 |
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| Symbol | |
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| ID | 4039939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 3370268 |
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| End bp | 3371137 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637978510 |
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| Product | type 4 prepilin peptidase 1 |
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| Protein accession | YP_585251 |
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| Protein GI | 94312041 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCTG TCCTGTCATC GCTGGCGGCG TTGCCGCCAG CTTTCCTTAT TGTCGCGGCA
GGGGTGGTTG GCCTGATGGT CGGCAGTTTC CTCAACGTGG TGATCCATCG TCTGCCGAAG
ATGATGGAGT ACGACGAGGC CAACTACATC GCGGAAATCC GTGGCGAACC GTTGCCGCAC
CCCGAGCGCT ATAACCTGAT GGTGCCGCGA TCCGCGTGCC CGAAGTGCGG CCACCAGATC
GCCCCCTGGG AGAACATCCC CGTCATCAGC TACCTGTTCC TGCGTGGCCG CTGCAAGGCC
TGCAAGACGC CGATCGGCAT CCGCTATCCG CTCGTCGAGC TGATCACGGC GGCGCTCAGC
GCCCTGGCGA TGTGGCACTT CGGTCCGACG GCGCAGGCGC TGGCCGCGAT CGTGATGACC
TGGTCGCTGG TCGCGTTGTT CATGATCGAT GCCGACACCC AGCTTCTGCC AGACCAGATC
ACGCTGCCGC TGCTATGGCT GGGCCTGCTG CTGAACCTGC AGGGCTTGTT CGCGCCGCTG
GCGGATGCCG TCATCGGCGC TGCGGCGGGC TACCTGCTGC TGTGGAGCGT CTACTGGCTC
TACAAGCTCG TGCGGGGCCG CGAGGGCATG GGCCACGGCG ATTTCAAGTT GATGGCGGCG
CTTGGCGCAT GGTTCGGCTG GCAGGCACTG CCCGCGCTGA TCCTGATGTC GTCGGTGGTC
GGTGCCGTGC TTGGCGGCGC GATGCTGGTC TTCCGCCGCA AGAGTAGTGA CACGACCTTC
CCGTTTGGCC CGTACATCGT CGGTGCCGGG CTGATCGTGC TGTTCTTTGG CGCAGACGTA
TTACCGCTGA CGCTGGTGGC CGGACACTAG
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| Protein sequence | MQAVLSSLAA LPPAFLIVAA GVVGLMVGSF LNVVIHRLPK MMEYDEANYI AEIRGEPLPH
PERYNLMVPR SACPKCGHQI APWENIPVIS YLFLRGRCKA CKTPIGIRYP LVELITAALS
ALAMWHFGPT AQALAAIVMT WSLVALFMID ADTQLLPDQI TLPLLWLGLL LNLQGLFAPL
ADAVIGAAAG YLLLWSVYWL YKLVRGREGM GHGDFKLMAA LGAWFGWQAL PALILMSSVV
GAVLGGAMLV FRRKSSDTTF PFGPYIVGAG LIVLFFGADV LPLTLVAGH
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