Gene Rmet_3063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3063 
Symbol 
ID4039891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3320115 
End bp3320603 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content61% 
IMG OID637978462 
Product3-dehydroquinate dehydratase 
Protein accessionYP_585204 
Protein GI94311994 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTTCTA CTCCTGCCGT CAGCCGCCCC GTCCGTTACC GCAAGGTGCT GGTTCTGCAT 
GGTCCGAACC TCAATTTGCT CGGGACGCGC GAGCCGCAGA CGTACGGACA CACGACGCTG
GACGATATCA ACGAAGCGCT GGCCAAGCGC GCGGCCGAAG CGGGCATCGA GTTGGATACG
TTCCAGTCGA ATCACGAGGG AGCCCTCGTG GACCGCATTC AGGCAGCGCG TGGCGAGGGG
GTGGACTTCA TCATCATCAA TCCGGCGGCC TATACCCATA CGAGTGTGGC CATGCGCGAT
GCGCTCGCTG GCGTGGCCAT TCCCTTCGTC GAGGTGCATC TGTCCAATGT GCATCGCCGC
GAGCCGTTCC GTCATCACTC CTATTTCTCT GATCAGGCGA TCGGGGTGAT ATGCGGCCTG
GGCTGGCAGG GTTATCTGCT GGCGCTGGAT TACGCGCTTG CACAGGAACA GACCGCATCA
TCTGGCTAA
 
Protein sequence
MSSTPAVSRP VRYRKVLVLH GPNLNLLGTR EPQTYGHTTL DDINEALAKR AAEAGIELDT 
FQSNHEGALV DRIQAARGEG VDFIIINPAA YTHTSVAMRD ALAGVAIPFV EVHLSNVHRR
EPFRHHSYFS DQAIGVICGL GWQGYLLALD YALAQEQTAS SG