| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3013 |
|---|
| Symbol | |
|---|
| ID | 4039841 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 3272057 |
|---|
| End bp | 3272608 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637978413 |
|---|
| Product | cytochrome B561 |
|---|
| Protein accession | YP_585155 |
|---|
| Protein GI | 94311945 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3038] Cytochrome B561 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 54 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00637618 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGACATCA AGAATTCCGA ATACCGTTTC AGTCCCTTGG TCATAGGCTT GCACTGGCTG
ACCGTGATTC TCATCATTGC GGTCTATGCG AGCATGGAAT TGCGCGGACT GGCACCCAAG
GGAGCCTTGA GAGACGCCAT GAAGTCCTTG CACTACCTGC TGGGCCTCAG CGTTCTGGTG
ATCGTCGTGA TCCGTATCGG GGTGCGCATC CAGGCGGGCG TGAAGCCCGC GATCCAACCA
CCCATGCCAC GCTGGCAGGC CACGCTCGCC GATGGCATGC ACTATGCGCT CTACAGCTTC
ATGCTCGCCA TGCCGCTGCT CGGATGGCTC ACCTTGAGTG CGGCGGGCAA GCCGATTGTT
CTGTTTGGCT TGCCCGTTCC CTCTCTGATC GGCACCGACG TTGCTTTGTC GCGCCAACTC
AAGGATGTCC ATGAGGCGCT GGCGACATTG GGCTATGTCT TGATCGGATT GCATGCGATG
GCGGCGCTGT TGCACCACTA CGTCATGCGT GACAACACAG TGGTTCGCAT GCTTCCCGGT
CGACGCCCCT GA
|
|---|
| Protein sequence | MDIKNSEYRF SPLVIGLHWL TVILIIAVYA SMELRGLAPK GALRDAMKSL HYLLGLSVLV
IVVIRIGVRI QAGVKPAIQP PMPRWQATLA DGMHYALYSF MLAMPLLGWL TLSAAGKPIV
LFGLPVPSLI GTDVALSRQL KDVHEALATL GYVLIGLHAM AALLHHYVMR DNTVVRMLPG
RRP
|
|---|
| |