Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2994 |
Symbol | |
ID | 4039822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 3251731 |
End bp | 3252609 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637978394 |
Product | phosphonate-binding periplasmic protein |
Protein accession | YP_585136 |
Protein GI | 94311926 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
TIGRFAM ID | [TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.567308 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAATC GCCGTAACTT CTCTCTTGTT GTCAGCGCAG CTTCTTTTGC TGCACTCCTT CCTCTGTGGG CTCATGCGCA GGGAAAGGAT CCATCAAAGC TTCGTGTCGC CCTTCTTCCA GATGAGAACG CTGCCAGCAT CATCCAGAAC GCGCAGCCTC TTAAGCGCTA TCTTGAACAG CAGCTCAAGA AGGATGTTGA GATTGTGGTG ACTACCGATT ACTCCTCGAT GATCGAGGCA ATGCGGTTCG GTCGGATTGA GGTAGCGTAC TTTGGACCGT TTTCGTACGT TTTGGCCAAA TCTAAGGCGT CCGGGATTGA GCCCTTTGCG GTGGGCGTTG AACGTGGGTC GCCCACATAC CAGTCGGTCC TCATCGCAAC GGCCGGAGGG CCGGTGAAAA CGCTTGAAGA CGTGCGCGGC AAGCCCTTCG GATTTGGCGA CCAGGCGTCC ACATCAAGCC ACCTTGCACC ACGTGCACAC CTGCTCAAGA AGTACAAGCT TGATGGTGAG AAGGACTATC GGCCAGTTCA CCTTGGGGCA CATGACGCGG TCGCACGTGC GGTGCAGTCG GGTCAGATTC CAGCCGGGGC TCTGTCCAAG CCGATTCTGG ACAACCTCAT CGCTCGAGGA AGCATTGATG CCACGAAGAT TGTTCAGCTT GACCTTTCTG CTCCCATTCC AAACTATCCG GTCGTCATGC AGGGGGACCT CAAGCCTGAG CTCAAAGCTG CCATCCGCTC TGCCTTTCTG GACATGAAGG ATGCTGAGGT GCTCAAGGCG TTTCGTGTCC AGGCGTTTGC CGCCACTGAT GACGCTGCAT ATGACGTCCT TAGGGATACC GCAACCATCC TGAAGCTTGA TTTGGGCCGT ATGCAATGA
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Protein sequence | MLNRRNFSLV VSAASFAALL PLWAHAQGKD PSKLRVALLP DENAASIIQN AQPLKRYLEQ QLKKDVEIVV TTDYSSMIEA MRFGRIEVAY FGPFSYVLAK SKASGIEPFA VGVERGSPTY QSVLIATAGG PVKTLEDVRG KPFGFGDQAS TSSHLAPRAH LLKKYKLDGE KDYRPVHLGA HDAVARAVQS GQIPAGALSK PILDNLIARG SIDATKIVQL DLSAPIPNYP VVMQGDLKPE LKAAIRSAFL DMKDAEVLKA FRVQAFAATD DAAYDVLRDT ATILKLDLGR MQ
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