| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2947 |
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| Symbol | secF |
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| ID | 4039775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 3203941 |
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| End bp | 3204915 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637978347 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_585089 |
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| Protein GI | 94311879 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTTT TCCGCATCAA GCGCGACATT CCGTTCATGA AGCACGCGTT GATCTTCAAC
GTGGTGTCCT TCCTGACGTT TGCCGCCGCT GTTTTCTTCC TCTGGCACAA GGGCCTGCAC
CTGTCGATCG AATTCACCGG CGGCACGGTG ATGGAGGTCA ACTACCAGCA GGCCGTCGAT
CTCGAGAAGG TCCGTGGCCA GGTCAGCAAG CTCGGCTACT CCGATGTGCA GGTGCAGAAT
TTCGGCACCT CGCGCGACGT GATGATCCGC CTGCCGCTGC AGAAGGGCCC GGACGGCAAG
CAGGTGACCT CCGCGCAGCA GAGCGAGCAG GTCATGGGCG CGCTGACGGC GGCCTCGCCT
GACGTCAAGC TGCAACGCGT GGAGTTCGTC GGCCCGCAGG TGGGCAAGGA ACTGGCCACG
GACGGCCTGC TGGCCCTGCT GTGCGTGGTG GCCGGTATCG TGATCTACCT GTCGTTCCGC
TTCGAATGGA AGTTCGCGGT CGCCGGTATC ATCGCCAACC TGCACGATGT GGTGATCATC
CTGGGCTTCT TCGCCTTCTT CCAGTGGGAG TTCTCGCTCT CGGTGCTGGC GGCGATCCTG
GCGGTGCTCG GCTACTCCGT GAACGAGTCG GTGGTGATTT TCGACCGGAT CCGCGAAGCC
TTCCGCAAGT ACCGCAAGAT GACTACGCAT GAAGTCATCG ACCACGCGAT CACCAGCACG
ATGTCGCGGA CCATCATCAC CCACGGCTCG ACCGAAATGA TGGTGCTGTC GATGTTCTTC
TTCGGCGGCC CGACGCTGCA CTACTTCGCC CTGGCCCTGA CTGTGGGTAT TCTGTTCGGT
ATCTACTCGT CGGTGTTCGT GGCCGCGGCG CTGGCGATGT GGCTCGGCGT GAAGCGCGAA
GACCTCGTCA AGGGCGACAA GAAAGGCGGC GACGTAACCG ACCGCAACGA CCCGAACTTC
GGCGCGCAAG CTTGA
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| Protein sequence | MEFFRIKRDI PFMKHALIFN VVSFLTFAAA VFFLWHKGLH LSIEFTGGTV MEVNYQQAVD
LEKVRGQVSK LGYSDVQVQN FGTSRDVMIR LPLQKGPDGK QVTSAQQSEQ VMGALTAASP
DVKLQRVEFV GPQVGKELAT DGLLALLCVV AGIVIYLSFR FEWKFAVAGI IANLHDVVII
LGFFAFFQWE FSLSVLAAIL AVLGYSVNES VVIFDRIREA FRKYRKMTTH EVIDHAITST
MSRTIITHGS TEMMVLSMFF FGGPTLHYFA LALTVGILFG IYSSVFVAAA LAMWLGVKRE
DLVKGDKKGG DVTDRNDPNF GAQA
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