Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2936 |
Symbol | |
ID | 4039764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 3191030 |
End bp | 3192073 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637978336 |
Product | twitching motility protein |
Protein accession | YP_585078 |
Protein GI | 94311868 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.745836 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATCG CGCAGCTATT GGCTTTTGCG GTCAAGAACA AGGCATCCGA TCTCCACCTC TCGGCTGACA TGCCGCCGAT GGTGCGTATT CACGGGGATA TGCGCCGCAT CAACGTCGCG GCAATGACGC ACAAGGACGT CCACGCCATG GTGTACGACA TCATGAGCGA CGTTCAGCGC AAGTCTTATG AAGAGCGCCT TGAGGTCGAT TTCTCCTTCG AGATCTCTGG TCTGTCCCGT TTCCGGGTCA ACGCCTATAC CACCCAGCGC GGCGCGGCCG CGGTGTTCCG GACAATTCCG TCGAAGGTCC TGACGCTCGA GGACCTGCGC GCGCCCGCCG TGTTCGCCGA TCTGTGCATG AAGCCGCGTG GCCTGGTGCT GGTCACCGGG CCCACGGGCT CGGGCAAGTC GACCACGCTC GCCGCGATGG TCGACCATCG CAACGACAAC GACATGGGTC ACATCCTCAC GGTGGAGGAT CCAATCGAAT TCGTGCATCA GTCCAAGAAG AGTCTGATCA ACCAGCGCGA GCTTGGCCCT CACACCCATT CGTTCGCCAA CGCGCTGCGC TCGGCACTGC GCGAGGACCC GGACGTGGTT CTGGTGGGCG AATTGCGTGA CCTGGAAACG ATCCGCCTGG CGCTGACCGC CGCGGAAACC GGTCACCTGG TTTTCGCCAC GCTGCACACG AGTTCGGCCG CCAAGACGAT TGACCGTGTG GTCGACGTGT TCCCGCCGGA AGAAAAGGAC ATGGTGCGAA CCATGCTGTC GGAGTCGCTC GAGGCCGTGA TCTCGCAGAC GCTGCTCAAG ACACGCGACG GCAACGGTCG GACGGCGGCA CATGAAATCA TGATCGCCAC GCCTGCGATT CGCCACCTGA TCCGCGAAAA CAAGATCGCG CAGATGTACT CGATGATGCA GACGTCGAGC GGCCTGGGCA TGCAGACGCT GGACCAGTGC CTGAGCGACC TGATCAAGCG GGGCATGATC AACTACAGCG ACGCGCGGGC GATTGCGAAA AATCCCGACG CCTTCATGGG TTAA
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Protein sequence | MDIAQLLAFA VKNKASDLHL SADMPPMVRI HGDMRRINVA AMTHKDVHAM VYDIMSDVQR KSYEERLEVD FSFEISGLSR FRVNAYTTQR GAAAVFRTIP SKVLTLEDLR APAVFADLCM KPRGLVLVTG PTGSGKSTTL AAMVDHRNDN DMGHILTVED PIEFVHQSKK SLINQRELGP HTHSFANALR SALREDPDVV LVGELRDLET IRLALTAAET GHLVFATLHT SSAAKTIDRV VDVFPPEEKD MVRTMLSESL EAVISQTLLK TRDGNGRTAA HEIMIATPAI RHLIRENKIA QMYSMMQTSS GLGMQTLDQC LSDLIKRGMI NYSDARAIAK NPDAFMG
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