| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2807 |
|---|
| Symbol | |
|---|
| ID | 4039634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 3053924 |
|---|
| End bp | 3055456 |
|---|
| Gene Length | 1533 bp |
|---|
| Protein Length | 510 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637978206 |
|---|
| Product | leucyl aminopeptidase |
|---|
| Protein accession | YP_584949 |
|---|
| Protein GI | 94311739 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0260] Leucyl aminopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.494526 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.367433 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTTA GCACAAAAGC CCTGGATCTG AGCAAAGCCG GCCAAAATGG TTTCTTGGCC
ACGAAGACGG ACTGTCTGGT GGTTGGCCTG TTCGAGGGCC AAAGTCTGGC CGGCGTGGCC
AAGGCGCTGG ACGTTGCCAC CAAGGGGCTG GTGGCGCGTC TGGTCAAGCA AGGCGACTTC
GAAGGCAAGC GCGGCACGCA ACTGATGCTG CACGAGGTGG CCGGCGTTGG CGCCGCCCGC
GTGCTGCTGG TGGGCCTGGG CAAGGAAGCC GATTTCAACG ACAAGGCCTT TGCCGAAGCC
GTGCGCACGG CCACGCGTGC CCTGGGCGGC ACGCGCGCCG CCTCGGCGCT CTGGTGCCTG
GTTCAGCAGC CACCGCAGCA GCGCGACGTG GCCTGGGCCA TCATCACCAC GATCACGCTG
GTCCGGGAGG CCGGTTATCG CCTGCTGGAG CGCCATCCCG AGCTCAAGCG CGCGCCCCGG
GGCGCCGGCG CCAACGAAAA GGCGTCGCTG CGCAAGATCG TGCTGGCCGT GGACGTGGGC
GACGCCAAGG CCGCCTCGCA GGCCGCCGTG CGTGGCACTG CCATCGCCAA CGGCATGGAA
CTGACCCGCG ATCTGGGCAA CCTGCCGTCC AACATCTGCA CGCCGACCTA TCTGGCCAAT
ACCGCCCGTG GCATCGCCAA GCGCCACAAG CTCAAGGTGG AGATCCTGGG TCGCAAGCAG
ATCGAGGCGC TCAACATGGG CGCCTTCCTT GCCGTGACCA AGGGCAGCGT CGAGCCGCCG
CAGTTCATCG TGCTGCGCTA TGACGGCGCG AGCGCCAAGC AGGCGCCGGT GGTGCTGGTG
GGCAAGGGCA TCACGTTCGA TACGGGTGGC ATCTCGCTGA AGCCGGGCGA GGGCATGGAC
GAGATGAAGT ACGACATGTG CGGCGCGGCA TCGGTGCTGG GCACGATCCA GGCCGTGGCC
GAAATGGGCC TGAAGCAGAA CGTGATCGCC GTGGTGCCGA CTTGCGAGAA CATGCCGAGC
GGCATCGCCA CCAAGCCGGG CGACGTAGTG ACCAGCATGT CCGGCCAGAC CATCGAAATC
CTCAATACCG ATGCCGAAGG CCGCCTGATC CTGTGCGACG CGCTGACTTA CGTGGAGCGC
TTCAAGCCGG CCGCCGTGAT CGACGTGGCC ACGCTGACCG GTGCCTGCAT CATCGCGCTC
GGCCACGTCA ACAGCGGCCT GTACGCCCGC AGTGACGCGC TGGCGGACCA GTTGCTGGGT
GCCGGCCGCA AGGCCATGGA TACGGCCTGG CGTCTGCCGC TGGACGATGA CTACCAGGAC
CAGCTCAAGT CGAACTTTGC CGATATGGCC AATATCGGTG GCCGTCCGGC CGGCAGCGTG
ACCGCGGCCT GCTTCCTGGC GCGTTATACC GAGAAGTACG ACTGGGCCCA CCTCGACATC
GCCGGCACAG CGTGGAAGAG CGGCGCGGCC AAGGGCGCCA CGGGCCGTCC GGTGCCGTTG
CTGACGCAGT TCCTGATGGA CCGCGCGGCC TAA
|
|---|
| Protein sequence | MEFSTKALDL SKAGQNGFLA TKTDCLVVGL FEGQSLAGVA KALDVATKGL VARLVKQGDF
EGKRGTQLML HEVAGVGAAR VLLVGLGKEA DFNDKAFAEA VRTATRALGG TRAASALWCL
VQQPPQQRDV AWAIITTITL VREAGYRLLE RHPELKRAPR GAGANEKASL RKIVLAVDVG
DAKAASQAAV RGTAIANGME LTRDLGNLPS NICTPTYLAN TARGIAKRHK LKVEILGRKQ
IEALNMGAFL AVTKGSVEPP QFIVLRYDGA SAKQAPVVLV GKGITFDTGG ISLKPGEGMD
EMKYDMCGAA SVLGTIQAVA EMGLKQNVIA VVPTCENMPS GIATKPGDVV TSMSGQTIEI
LNTDAEGRLI LCDALTYVER FKPAAVIDVA TLTGACIIAL GHVNSGLYAR SDALADQLLG
AGRKAMDTAW RLPLDDDYQD QLKSNFADMA NIGGRPAGSV TAACFLARYT EKYDWAHLDI
AGTAWKSGAA KGATGRPVPL LTQFLMDRAA
|
|---|
| |