Gene Rmet_2782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2782 
Symbol 
ID4039608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3029385 
End bp3030287 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content67% 
IMG OID637978181 
Productperiplasmic binding protein 
Protein accessionYP_584924 
Protein GI94311714 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.21111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.398408 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCT TCTACGTAGC GAGTGCAGCA AGTGCCCTGC TGATTGCCGC CATGCCGGCG 
CATGCCGCGG TCTCCGTGGT CGACGATGCG GGCGAGACCG TCACGCTGGC GCAGCCGGCA
CGCCGCATCG TCTCTCTGGC GCCGCACGTG ACCGAACTGA TCTTCGCAGC GGGCGGCGGC
GACCGCATCG TCGGCACAGT CAGCTACAGC GACTACCCGC CGCAGGCGCG CGATATTCCG
CGCGTGGGTG ACAACAAGGC GCTCGATCTC GAACGGATCG CCGCGCTCAA ACCCGACCTC
ATCGTGGTCT GGCGCCACGG TAACGCGCAG AAGCAGACCG ACCGCCTGCG CGCGCTCGGC
ATGCCGCTGT TCTTCAGCGA GCCACGCAAG CTCGATGGCA TCGCCGACAA TCTGGAAAAG
CTCGGCACGC TGATGGGCAC CACGCCCGTG GCCCACCGCG CCGCTACCGA TTTCCGCCAG
CAGGTAAGCA CGCTGCGCAA AACCTACGCG GGCCGCCCGC CCGTGACCGT GTTCTATCAG
GTCTGGCAGC AGCCGCTGAT GACGCTGAAC GGCGAGCACA TGGTCAGCGA CCTGCTCGCG
CTATGCGGCG GTCGCAACCT GTTCGGGAAG GAAGCGGCAC TGGTGCCAAC GGTCTCGGTC
GAAGCCGTGG TCGCGGGCAA CCCCGAGGTC ATGCTGACCG CCGGTATGGG CGCCACGCGA
TCCGACAAGC CGCTCGCGGA CTTTGCGATG TGGGAGAAGT GGAAGCAGGT TACGGCCGTG
GCACGCAACA ACCTGTTCGT GATTGACGGC GATCTGGTCA ATCGCGCTGG CCCGCGCGTG
GCCCAGGGCG CGGCGGAGAT TTGCAAGGAC CTGGACGTGG CGAGGTCACG GCGGCCAGGC
TGA
 
Protein sequence
MKAFYVASAA SALLIAAMPA HAAVSVVDDA GETVTLAQPA RRIVSLAPHV TELIFAAGGG 
DRIVGTVSYS DYPPQARDIP RVGDNKALDL ERIAALKPDL IVVWRHGNAQ KQTDRLRALG
MPLFFSEPRK LDGIADNLEK LGTLMGTTPV AHRAATDFRQ QVSTLRKTYA GRPPVTVFYQ
VWQQPLMTLN GEHMVSDLLA LCGGRNLFGK EAALVPTVSV EAVVAGNPEV MLTAGMGATR
SDKPLADFAM WEKWKQVTAV ARNNLFVIDG DLVNRAGPRV AQGAAEICKD LDVARSRRPG