| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2711 |
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| Symbol | |
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| ID | 4039537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 2943081 |
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| End bp | 2944562 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637978110 |
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| Product | Type I secretion outer membrane protein TolC |
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| Protein accession | YP_584853 |
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| Protein GI | 94311643 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTTC CGCTTTCCGC CGTGCCCGGT GCGGCCAGGA GATCCCTGCC GCTCGCGGCT
GCTCTTGTGG CCATGCTGCA CTTGCCGGCC GCGGAGTCAG CCGATCTGCT GCAGGTGTAT
CGCGATGCGC AATCCAATGA CGCCCAGTTC GCCAGCGCAC GCGCGCAGCT CGTCGCCACG
CGCGAGAAGC TGCCCCAGGC GCGCTCGGGC CTGTTGCCGC AGGTCTTTGG CACGGCAGGC
GCGCAGCGGA CCCAGGCCGA CTACAGCTCG CCGGTCGACG TCACCCGCTA TTTCAATGCC
AACACCTGGC AGTTGCAGCT TACACAGCCG CTGTTCCGCT GGGATCGCTG GGAAACCTAC
AAGCAGGGAG AACTGGCCGC ACTGGCGGGC GAGATCACCT TCCAGCAGGC ACAGCTCGAC
CTGATCACAC GTGCCTCGCA GGCGTACTTC GATGTGTTGG CCGCGCAGGA CAACCTCTAC
CTGGCGGGTG CCCAGAAGAA GGCCATTGGC GAGCAACTCG AGCAGGCCAA GCGCAATTTC
GAGGTAGGCA CCGCCACCAT TACCGACGCC AACGATGCCC AGGCGCGCTA CGACCTGGCC
ACCTCCACGG AGATTGCTTC GCAAAGCGCG CTCGAGGTGT CCCGCGCCAC GCTGCAACAG
ATCACCGGCA AATCCGTCGA CGAACTGATG GGACTGCGCT CCGAAGCGGC GATTCCGGGC
CCGGCGCCGG CCGATGTCAA CGCATGGGCG GCGCAGGCCG AACAGGCCAA TCCGCAAGTC
AGCCTGGCCG GATACAACCT CGAAACGGCG CAGCGCGAAA CGAACAAGGC CAAGGCAGGC
CACCTGCCTT CCGTCGACCT CGTCGCTTCA TACGGTTACA CCAACGCCCA GGGCACGGCC
ACGCAGCTCA GTAACGTAGG CAGCCGCTAC AACTCGGGCG TGGTGGGCGT CCAGTTGAGC
ATCCCGATCT TCACCGGTGG CCAGATCCAG TCGCGCGTGC GCGAAACCCT GGCGCTTGCC
GACAAGGCCG CAAGCGATCT CGAGTTCGCG CGCCGTACCG CCGCGCAGAC CGCCCGGCAG
ACCTACTCGG GTGTGTACAA CGGGCTCGCG CAGGTCAAGG CGCTCGAGGC AGCGGAACGC
TCGGCGCAAA GCGCAGTGGA ATCGAACCAG CTTGGCTATG AAGTGGGCGT GCGCATCAAT
ATCGACGTGC TGAACGCGGA GGCGCAACTG TTCCAGACCC GCCGCGACCT GGCCAAGGCG
CGCTACGACA CGATCATGAA TGGCATGCGC CTGAAGGCTT CCACCGGCGC GCTGTCGGAA
GACGACGTGG TGCAGATCAA CACGCTGCTG ACGTCGGCGC CGGGAGCGAT GTACAAGTTG
CCGGGGAAAA CAAGAGTGGG TGCCATGCCC GCGCACAAGC CGGCACGCGG TGAACGCGGC
CGACGTGAAA GCATGGCTCA GGGTGTTACG CCACGGTCCT GA
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| Protein sequence | MSFPLSAVPG AARRSLPLAA ALVAMLHLPA AESADLLQVY RDAQSNDAQF ASARAQLVAT
REKLPQARSG LLPQVFGTAG AQRTQADYSS PVDVTRYFNA NTWQLQLTQP LFRWDRWETY
KQGELAALAG EITFQQAQLD LITRASQAYF DVLAAQDNLY LAGAQKKAIG EQLEQAKRNF
EVGTATITDA NDAQARYDLA TSTEIASQSA LEVSRATLQQ ITGKSVDELM GLRSEAAIPG
PAPADVNAWA AQAEQANPQV SLAGYNLETA QRETNKAKAG HLPSVDLVAS YGYTNAQGTA
TQLSNVGSRY NSGVVGVQLS IPIFTGGQIQ SRVRETLALA DKAASDLEFA RRTAAQTARQ
TYSGVYNGLA QVKALEAAER SAQSAVESNQ LGYEVGVRIN IDVLNAEAQL FQTRRDLAKA
RYDTIMNGMR LKASTGALSE DDVVQINTLL TSAPGAMYKL PGKTRVGAMP AHKPARGERG
RRESMAQGVT PRS
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