Gene Rmet_2680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2680 
Symbol 
ID4039505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2912883 
End bp2914409 
Gene Length1527 bp 
Protein Length508 aa 
Translation table11 
GC content63% 
IMG OID637978078 
Productserine hydroxymethyltransferase 
Protein accessionYP_584822 
Protein GI94311612 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCGACT GGCGAAGTCA GTGGGTACTA CCACGAGGAA GCGCAAGTTC ATTGGGCGTG 
ATATTCGATG CGCCTGCCGC TCGCCTGGGC AGCGAATGGG AAGCAGGGTG CGCCCTGCAC
CGGCTGGTCG CGTTTTCGCG CCCCCGGTGC TGGACGCCAG TGCCTTCCCC GCGCGCCCTA
ATACGCGAAA ATCCCGCAAT ACAGAGTAGC GTCGACAGGC ATCCGGTTTT CGTACCGGCC
GTGCCATCCG CTCTCCCTTT TAAACAGACG AGTCACGCCA TGTTTGAACG TAGCCGCTTC
ACGATCGAGC AGATCGACCC CGAAGTCTTT GCCGCGATCC AGAAGGAAAA CCAGCGTCAG
GAAGACCACA TCGAACTGAT CGCTTCCGAG AACTACACCT CGCCGGCCGT GATGGCCGCC
CAGGGTTCGC AGCTCACCAA CAAGTACGCC GAAGGCTATC CCGGCAAGCG CTACTACGGC
GGTTGCGAGT ACGTGGACGT GGTGGAGCAG CTCGCCATCG ACCGCGTGAA GCAACTGTTT
GGCGCCGAAG CCGCCAACGT GCAGCCGAAC TCGGGCTCGC AGGCCAACCA GGGCGTGTTC
TTCGCCATGC TCAAGCCGGG CGACACGATC ATGGGCATGA GCCTGGCCGA AGGCGGTCAC
CTGACCCACG GCATGGCGCT GAACATGAGC GGCAAGTGGT TCAACGTGGT CAGCTACGGC
CTGAACGCGC AGGAAGACAT CGACTACGAC GCGCTTGAAA AGCTGGCCCA CGAGAAGAAG
CCGAAGCTGA TCATCGCCGG CGCATCGGCT TTCGCGCTGC GCATCGACTT CGAACGCATC
GCCAAGGTTG CCAAGGCTGT TGGTGCCTAC TTCATGGTGG ACATGGCCCA CTATGCCGGC
CTGATCGCCG CCGGTGTGTA CCCGAACCCG GTGCCGCACG CCGACTTCGT GACCACCACC
ACCCACAAGA GCCTGCGTGG CCCGCGCGGT GGCGTGATCC TGATGAAGGC CGAGCATGAG
AAGGCCATCA ACTCGGCCAT CTTCCCGGGC ATCCAGGGTG GTCCGCTGAT GCACGTGATT
GCCGGCAAGG CCGTGGCCTT CAAGGAAGCG CTGCAGCCGG ACTTCAAGGC GTATCAGGAA
CAGGTGGTCA AGAACGCCGC CGCACTGGCC GAAACGCTGA TCGCCCGCGG TCTGCGCATC
GTATCGGGCC GTACGGAAAG CCACGTGATG CTGGTGGACC TGCGCGCCAA GAAGATCACC
GGCAAGGAAG CCGAGAAGAT CCTCGGCGAC GCCCATATCA CGGTGAACAA GAACGCGATC
CCGAACGATC CGGAAAAGCC GTTCGTCACC TCGGGCATCC GCCTGGGCTC GCCGGCCATG
ACCACGCGCG GCTTCAAGGA AGAAGAAGCC CGCCAGGTGG CCAACCTGAT CGCCGACGTG
CTGGACAACC CGCACGATGA GGCCAACATC GCCGCCGTGC GCGAACAGGT TGCCGCACTG
ACCCGTCGCT TCCCGGTCTA CGGCTGA
 
Protein sequence
MRDWRSQWVL PRGSASSLGV IFDAPAARLG SEWEAGCALH RLVAFSRPRC WTPVPSPRAL 
IRENPAIQSS VDRHPVFVPA VPSALPFKQT SHAMFERSRF TIEQIDPEVF AAIQKENQRQ
EDHIELIASE NYTSPAVMAA QGSQLTNKYA EGYPGKRYYG GCEYVDVVEQ LAIDRVKQLF
GAEAANVQPN SGSQANQGVF FAMLKPGDTI MGMSLAEGGH LTHGMALNMS GKWFNVVSYG
LNAQEDIDYD ALEKLAHEKK PKLIIAGASA FALRIDFERI AKVAKAVGAY FMVDMAHYAG
LIAAGVYPNP VPHADFVTTT THKSLRGPRG GVILMKAEHE KAINSAIFPG IQGGPLMHVI
AGKAVAFKEA LQPDFKAYQE QVVKNAAALA ETLIARGLRI VSGRTESHVM LVDLRAKKIT
GKEAEKILGD AHITVNKNAI PNDPEKPFVT SGIRLGSPAM TTRGFKEEEA RQVANLIADV
LDNPHDEANI AAVREQVAAL TRRFPVYG