| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2624 |
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| Symbol | |
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| ID | 4039450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2855702 |
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| End bp | 2858506 |
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| Gene Length | 2805 bp |
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| Protein Length | 934 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637978025 |
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| Product | DNA polymerase I |
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| Protein accession | YP_584770 |
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| Protein GI | 94311560 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.972131 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.775806 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGATA GTCCAAAAAC ACTCTTGCTC GTCGATGGAT CGAGCTATCT ATATCGCGCG
TATCACGCTC TGCCGGACCT GAGGAATGGC GAAGGTCTGC CCACGGGGGC AATCTACGGC
ATGATCAATA TGCTGCGCAA GCTGCGCAAT GATTACCCGG CACAGTATAT CGCCTGTGTG
TTCGACGCCA AGGGCAAGAC GTTCCGGGAT GACATGTATC CGGCATACAA GGAGCATCGC
CCGTCGATGC CCGAGGACCT CGCGAAGCAG ATCGAGCCGA TCCACGAGGC CGTGCGCGCG
CTTGGCTGGC CGATCGTGGT CGTGGAAGGC GTGGAGGCCG ACGACGTGAT CGGCACGCTC
GCGCTCCAGG CGTCGCAGCA GGGCGTGAAC ACGGTCGTTT CTACGGGCGA CAAGGATCTT
GCGCAGCTCG TCAATGACAC CGTCACGTTG GTCAACACCA TGAGCGGCGA GGTTCTCGAC
CCGCCGGGCG TGGTGGCGAA GTTTGGCGTG CCGCCCGAGC GCATCGTCGA CTACCTGTCG
CTGATCGGTG ACGCCGTGGA CAACGTGCCC GGCGTGCCGA AGGTCGGTCC GAAGACCGCG
GTCAAATGGC TGACCGAATA CGGCACGCTG GACGACATCA TGGGTAACGC CGAGAAGATC
AAGGGCGTGG TAGGCGAGAA TCTGCGCAAC ACGCTCGAAT GGCTCCCGCG CGCGCGGGAA
CTGGTCACGG TCAAGACCGA TTGCGACCTG AGCGGTGCCG TTGCCGATTT CCAGGCGCTG
CACGACCTTG GCGAAGACAA GGAAAAGCTG ATCGCGTTCT TCCAGCGCTA CGGATTCAAG
TCGTGGCTGC GCGAGGCAAC CGGTGAGTCG CTGCCGAACG CACGCGCGGC AGCGCGCGCG
GTGCCGAAGG CCGCGCCGGC GCAGGGTGGG CTGTTCGATG CGCCGGCGCA AGCCGACGCC
CCAGCCGAAG ATGTGCCCCC GGCCGAGATC CGCTACGAGA CCGTGACCAC CGAGGCCGCG
CTCGATGAAT GGCTGCGCAA GATCGCCGAT GCGCCGATCG TCGCCATCGA TACCGAAACG
ACCTCGCTCG ATCCGATGCT GGCGCAGCTC GTCGGCATCT CGCTGTCCGT CGAGCCGGGC
GCGGCTGCCT ATATTCCCGT GGCGCATCGC GGCCCGGACG TCGCGGGTCT CGAGAACCAT
GGCCAGCTCT CGCGCGAGTA CGTGCTCGAG CGTATGCGCG GATGGCTCGA GGATCCGGCG
CGTCCGAAGC TCGGTCAGCA CCTGAAGTAC GACTCGCACG TGTTTGCCAA CCACGGCGTA
GCGCTGCGCG GCATCGCGCA TGACACGATG CTGGAAAGCT ATGTGCTGGC TTCGTACCGC
AATCACGGCA TGGACAGCCT GGCCGAGCGC TTGCTGAGCC TGAAGACGAT CACGTACGAG
GAAGTTTGTG GCAAGGGCGC GAACCAGATC GGCTTCGACC AGATCGACCT GCCGCGCGCC
ACCGAATATG CGGCCGAGGA TGCCGACGTG ACACTGCGCC TGCATCGCAA GATGCAGCCG
CAGCTCGAGG CATCGGAAGG GCTGAAGTAC GTCTACGAAC AGATTGAGAT CCCGGTCTCG
GTGGTGCTGC AGAAGATCGA GCGCAACGGC GTGCTGATCG ATGCCGACCG CCTGGCCGCG
CAGAGCGCCG AGCTGGGTCT ACGCATGATG GACCTCGAGC GTGCCGCGCA CGATGCGGCG
GGCCAGCCGT TCAATCTCGG ATCGCCGAAG CAGATCGGCG AGATCCTGTT CAACCAGATG
AAGCTGCCGG TGGTCAAGAA GACCGCCAGC GGCGCGCCGT CGACCGATGA AGAGGTGCTG
CAGAAGCTGG CGGACGACTA TCCGCTGCCC AAGCTGCTGC TGGACTACCG GGGCCTGTCG
AAGCTGAAGT CCACCTACAC GGACAAGCTG CCGAAGATGG TCAACCCGAA TACCGGGCGC
GTGCATACGA GCTACGGGCA GGCCACTGCG GTGACGGGTC GCCTCGCATC GACCGATCCG
AACCTGCAGA ACATTCCGGT GCGCACCGAG GAAGGTCGCC GCATTCGCGA GGCGTTCATC
GCCGCGCCCG GCAACGTGAT CGTCTCGGCC GACTATTCGC AGATCGAACT GCGCATCATG
GCGCATATCT CGGGCGACGA GAACCTGCTG CGCGCGTTCG CCAATGGCGA GGATATTCAC
CGTGCCACGG CTGGCGAAAT CTTTGGCGTC GAGCGCGAGG CCGTCAGCAG CGAGCAGCGC
CGCTATGCGA AGGTGATCAA CTTCGGTCTG ATCTATGGCA TGAGCGCGTT CGGCCTGGCC
AGCAACCTTG GCATCGAGCG CGAGGCGGCC AAGCACTATA TCGACCGCTA CTTCATGCGT
TACCCCGGCG TGGCGCACTA CATGGAGCAG ACGCGCCAGA CGGCGCGCGA GCAGGGCTAT
GTCGAGACTG TGTTCGGCCG CCGCCTCTGG CTGCCGGACA TCAACGGCGG CAATGGCCCG
CGCCGTCAGG CCGCAGAACG CGCGGCCATC AACGCGCCGA TGCAGGGCAC CGCGGCCGAT
CTGATCAAGC TGTCGATGAT CGCCGTGCAG GACTGGCTCG AAGGCGAGCG TCTCGGCACG
CGCCAGATCA TGCAGGTGCA TGATGAACTG GTGCTCGAAG TGCCGCAGGC CGAACTCGAA
CTTGTCCGCG TGAAGCTGCC CGAGCTGATG TGCGCGGTGG CCACCCTCAA TGTGCCGCTG
GTTGCCGAAG TGGGTAGTGG CGCGAACTGG GAAGAGGCCC ACTGA
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| Protein sequence | MSDSPKTLLL VDGSSYLYRA YHALPDLRNG EGLPTGAIYG MINMLRKLRN DYPAQYIACV
FDAKGKTFRD DMYPAYKEHR PSMPEDLAKQ IEPIHEAVRA LGWPIVVVEG VEADDVIGTL
ALQASQQGVN TVVSTGDKDL AQLVNDTVTL VNTMSGEVLD PPGVVAKFGV PPERIVDYLS
LIGDAVDNVP GVPKVGPKTA VKWLTEYGTL DDIMGNAEKI KGVVGENLRN TLEWLPRARE
LVTVKTDCDL SGAVADFQAL HDLGEDKEKL IAFFQRYGFK SWLREATGES LPNARAAARA
VPKAAPAQGG LFDAPAQADA PAEDVPPAEI RYETVTTEAA LDEWLRKIAD APIVAIDTET
TSLDPMLAQL VGISLSVEPG AAAYIPVAHR GPDVAGLENH GQLSREYVLE RMRGWLEDPA
RPKLGQHLKY DSHVFANHGV ALRGIAHDTM LESYVLASYR NHGMDSLAER LLSLKTITYE
EVCGKGANQI GFDQIDLPRA TEYAAEDADV TLRLHRKMQP QLEASEGLKY VYEQIEIPVS
VVLQKIERNG VLIDADRLAA QSAELGLRMM DLERAAHDAA GQPFNLGSPK QIGEILFNQM
KLPVVKKTAS GAPSTDEEVL QKLADDYPLP KLLLDYRGLS KLKSTYTDKL PKMVNPNTGR
VHTSYGQATA VTGRLASTDP NLQNIPVRTE EGRRIREAFI AAPGNVIVSA DYSQIELRIM
AHISGDENLL RAFANGEDIH RATAGEIFGV EREAVSSEQR RYAKVINFGL IYGMSAFGLA
SNLGIEREAA KHYIDRYFMR YPGVAHYMEQ TRQTAREQGY VETVFGRRLW LPDINGGNGP
RRQAAERAAI NAPMQGTAAD LIKLSMIAVQ DWLEGERLGT RQIMQVHDEL VLEVPQAELE
LVRVKLPELM CAVATLNVPL VAEVGSGANW EEAH
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