Gene Rmet_2613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2613 
Symbol 
ID4039439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2842060 
End bp2844099 
Gene Length2040 bp 
Protein Length679 aa 
Translation table11 
GC content64% 
IMG OID637978014 
Productalkaline phosphatase 
Protein accessionYP_584759 
Protein GI94311549 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3540] Phosphodiesterase/alkaline phosphatase D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.645323 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATCGCC GCAAATTTCT GCAATGGGGA AGTTTCGTCA CCGTGACGGT GGCCACCACC 
GGCCTGGCCG GCTGCGGTGG TGACGACAAC GCCTCGCCCG CCACCCCCTC GACCAATCCG
CCCACGACGC CGCCCGCCAG CGAGCCGGGC AACACGTTCA CGTTCCAGCA AGGCGTGGCA
TCCGGCGACC CGAAACCCGA TAGCGTCGTG CTCTGGACGC GCGTGGACGG CAACAACGGC
AGCAAGCCCG TCAACGTGCA ACTGCAGGTG TCGACACAGG CGGACTTCAG CACGCTGATC
GTCAACAGCA CACTGGCTGC CTCGCCTGAC TGGGACTACA CGCTGCGCAA CAAGGTGACG
GGCCTGTCCG CCGGCACCAC GTACTACTAC CGTTTCCAGG TTGGCAATCA GACCAGTCCC
GTGGGCCGCA CCAAGACCGC GCCCGCCGCC GGCACGCCAC TGTCGCAACT GAAGTTCGCC
TTCATCACCT GCCAGGACTG GAGCGTGAAT CACTGGGCCG GCATGGAGGA GCTTGTCAAC
GAAGACCTCG ATTTCGTGGT CCACATGGGC GACTACATCT ACGAGACCGT CGGCGCGGCG
TTCCAGACCG GCAAGGTGGA AACGCGCCAC GCACAATTGA CGCTGCCCAA TGGCACGCTG
CGCGACGATG GCGCCCACTA CGCGACCACG ATCGACGACT ATCGCTACCT CTACAAGTCA
TATCGCAGCG ATCCGCGTCT GCAGGCGCTG CACGCGCGCT TTCCCGTGAT CGCAATCTGG
GACGACCACG AATTCTCCGA CGACTGTTGG CAGGACCATC AGACCTATAC CGCCGCTGAC
GATGCCACGC CGCGCACCGC GCGCCGGCGC GCGGCGAACC AGGCGTGGTT CGAGTTCATG
CCAGCCGACG TCAGCTTCGA CCAGGCGGAT ACGTCGTTCC ACAACATCCA GATCTACCGT
TCGTTCACGT TCGGCAACCT GGCCACGCTG GTGATGACGG ACGAGCGGCT CTATCGCGCC
GATCATGTGA TTCCGGAACA GGCGGCGGGC AGCGAAATCG GCAGCCGCTA CTTCGTGCCG
AAGACCACGC TGGCCGCGCT GGAGGGCAGC AAGCTGGCCG CCGCTGGTGG CGCGCTGACG
CCGGTGTCGA TACTTGGCGA CACCCAACGC GGCTGGTGGC AACAGCAGAT AGGCAATGCC
ACGACCACGT GGAAGCTGTG GGGCAACGAG GTCTCGTTGC TACGCATGCA GATTGACGGG
GCGCTGGCGG TCGGATCGTT GCTGGCCGAC GCCGTGATCG CGCAAATTCC CGCGCTGGGA
TCGCAGAAGC GGCCCCTGAC CGGCGCCATT GCGCAGGATC TGAAGGACGC AAAGGCCGCC
AACAGCTACC AGGCACCGGC CTTTACCCAG TTGCGCGGCC TGCTGGCGGG ACTGACCGTG
CCCGCGCTCC AGATCAACGC CATCGTGGCC GCGCTGACCA GTGGTCTGCC GCCTGCGATG
CTGATCGACC AGTTCATTCT CAACGCCGAC CAGTGGGATG GCTACAACGC CGAGCGCAAG
GCCATGATGG CCTTCCTGAA GATGCAGCGC ATCAGCAATG TGGTGGCGCT GACCGGCGAC
ATCCACGCGT TCTTCGCGGG CCCGGTCATG GACGACTACG ACGCCGCGAC GCCAGTCCCG
GTCATGGTGG ATCTGGTCAC GGCGGGTCTG TCGAGCAACT CGTTCCAGAG CTACTTCAAG
AGCGTGGTAG ACAGCGACGC AGCATTCGCG GACGCAAAAC CGCTGGTCTA CACGACCGAT
GGCAACGGGG CGATGGTGAA CACGTTCAAC ACGACGCTGA CGTCGTTTAA TCCGTGGCTG
ACGTATGTGA ACTCCGACGC GCAGGGTTAC GCGGTGGTGA CGCTGGCGGC TTCGAAGCTG
AGTTGCAGCT TTCACAAGCT CAAGCCAATC GCGGACGGCG TGGCCCCGGC GATGCCGGCG
ACAGCCAGTG TGCAGGTGGT GGAGGTTGCG GCGGGAACGC CTGCGGTGAC GCTGGCCTGA
 
Protein sequence
MDRRKFLQWG SFVTVTVATT GLAGCGGDDN ASPATPSTNP PTTPPASEPG NTFTFQQGVA 
SGDPKPDSVV LWTRVDGNNG SKPVNVQLQV STQADFSTLI VNSTLAASPD WDYTLRNKVT
GLSAGTTYYY RFQVGNQTSP VGRTKTAPAA GTPLSQLKFA FITCQDWSVN HWAGMEELVN
EDLDFVVHMG DYIYETVGAA FQTGKVETRH AQLTLPNGTL RDDGAHYATT IDDYRYLYKS
YRSDPRLQAL HARFPVIAIW DDHEFSDDCW QDHQTYTAAD DATPRTARRR AANQAWFEFM
PADVSFDQAD TSFHNIQIYR SFTFGNLATL VMTDERLYRA DHVIPEQAAG SEIGSRYFVP
KTTLAALEGS KLAAAGGALT PVSILGDTQR GWWQQQIGNA TTTWKLWGNE VSLLRMQIDG
ALAVGSLLAD AVIAQIPALG SQKRPLTGAI AQDLKDAKAA NSYQAPAFTQ LRGLLAGLTV
PALQINAIVA ALTSGLPPAM LIDQFILNAD QWDGYNAERK AMMAFLKMQR ISNVVALTGD
IHAFFAGPVM DDYDAATPVP VMVDLVTAGL SSNSFQSYFK SVVDSDAAFA DAKPLVYTTD
GNGAMVNTFN TTLTSFNPWL TYVNSDAQGY AVVTLAASKL SCSFHKLKPI ADGVAPAMPA
TASVQVVEVA AGTPAVTLA