| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2582 |
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| Symbol | |
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| ID | 4039407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2806056 |
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| End bp | 2807726 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637977982 |
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| Product | DEAD/DEAH box helicase-like protein |
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| Protein accession | YP_584728 |
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| Protein GI | 94311518 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGTTGA CATCGCAGGC GCCGATACTG GCTAGCGTCC GGGATGACCG CGCCCGGGCA
GTAATGGTAG AATCCAAGTC TTTGATTTTC CGGGCAATTC ACCCTTTGTC CGGTCTCAGT
TCCAGACGCG TGTCCGATTG CGACGGCTTC GCGCCCTGCA CAGACACCTC AACCATGACG
ATGACAACCA CACAAGACCA GGCCCCAGCA GCAGAGCAGA CGTTCGAAAG CTTCGGGCTG
GATCCGCGCA TTCTGCGCGC CTTGACCGAA CAGGGTTACA CCAAGCCGAC GCCGATTCAG
GCGCAGGCGA TTCCCGTGGT GTTGCTGGGC AAGGATGTGA TGGGCGCCGC GCAGACGGGC
ACCGGCAAGA CCGCTGGTTT CGCGCTACCG ATCATTCAGC GTCTGCTGCC GCTCGCCAAC
GCGAGTGCCT CTCCGGCGCG TCACCCGGTG CGCGCGCTGA TGCTGACGCC GACGCGCGAA
CTGGCCGATC AGGTCTACGA CAACGTCGCC CGGTATGCCA AGCACACTGA TCTGCGCAGC
ACGGTGGTCT TCGGTGGCGT CGACATGAAC CCGCAGACCG ATGCGCTGCG CCGTGGCGTG
GAAATCCTCG TGGCCACGCC GGGCCGTCTG CTCGATCACG TGCAGCAGAA GTCGGTGAAC
CTGTCGCAGG TGCAGATGCT GGTGCTCGAC GAAGCCGACC GCATGCTCGA CATGGGCTTC
CTGCCCGACC TGCAGCGCAT CATTAACCTG CTGCCGGCGC AGCGCCAGAC GCTGCTGTTC
TCGGCCACGT TCTCGCCCGA AATCAAGAAG CTGGCCTCCA GCTACCTGAA GCAGCCGGTG
ACGATCGAAG TGGCGCGCAG CAACTCGACC AACGAGAACG TGCGTCAGGT GGTGTATCAG
GTGCAGGATG GCCACAAGCA GGCCGCCGTG GTGCATCTGC TCAAGCAGCG CGCCAACGAA
CAACAGTCGC GCCAGTGCAT CGTTTTCGTC AATAGCAAGA TTGGTTGCTC GCGTCTGGCG
CGTCATCTGG AGCGCGAGGG CATCAACGCC GCCGCGATTC ACGGCGACAA GACGCAGACC
GAGCGTATGC AGACGCTCGA CGGTTTCAAG AATGGCACGA TCGACGCGCT GGTGGCCACC
GATGTGGCGG CCCGTGGTTT GGACATTCCC GCCATGCCCT GCGTGATCAA CTTCGACCTG
CCGTTCAGTG CCGAAGACTA CGTGCACCGC ATCGGCCGCA CAGGCCGTGC TGGCGCCAGC
GGCGACGCGC TTTCGATCTT CGTGCCGGGC AATGACGACC GTCTGCTGGC CGACATCGAG
AAGCTGATCA AGCGCAGCAT TCCACGCGGC TCGCTGGACG GCTTCGATCC GACCGGCGAG
CGTGCGCGTC AGGAAGACAG CGATCGTCGC CGCGCGCGTA CGGAAGTTCG CCGCGTTCGC
GACAATGGCG AGGGCGAGGA GCAGCAGCGC CGCCGCCGTA CCGAGCCGAA TGGTCGCCAG
GCGTTCCGTC CGTCGGACGA TCCGTTCTTC TCGCGTCCGT ACGAGCCGTC GGGCAGCTAC
ACGCCGGCAC CGAAGACCGA GGAACAACTG GCCGCCGCGC TGACGCGTGG ACGTCAGGCG
CCCAAGCGCC CCGTGGCCGC GCTGCTCGGC GGCGTGCCGC GCAAGTCCTG A
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| Protein sequence | MLLTSQAPIL ASVRDDRARA VMVESKSLIF RAIHPLSGLS SRRVSDCDGF APCTDTSTMT
MTTTQDQAPA AEQTFESFGL DPRILRALTE QGYTKPTPIQ AQAIPVVLLG KDVMGAAQTG
TGKTAGFALP IIQRLLPLAN ASASPARHPV RALMLTPTRE LADQVYDNVA RYAKHTDLRS
TVVFGGVDMN PQTDALRRGV EILVATPGRL LDHVQQKSVN LSQVQMLVLD EADRMLDMGF
LPDLQRIINL LPAQRQTLLF SATFSPEIKK LASSYLKQPV TIEVARSNST NENVRQVVYQ
VQDGHKQAAV VHLLKQRANE QQSRQCIVFV NSKIGCSRLA RHLEREGINA AAIHGDKTQT
ERMQTLDGFK NGTIDALVAT DVAARGLDIP AMPCVINFDL PFSAEDYVHR IGRTGRAGAS
GDALSIFVPG NDDRLLADIE KLIKRSIPRG SLDGFDPTGE RARQEDSDRR RARTEVRRVR
DNGEGEEQQR RRRTEPNGRQ AFRPSDDPFF SRPYEPSGSY TPAPKTEEQL AAALTRGRQA
PKRPVAALLG GVPRKS
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