Gene Rmet_2480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2480 
Symbol 
ID4039303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2693263 
End bp2694390 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content62% 
IMG OID637977879 
Productextracellular ligand-binding receptor 
Protein accessionYP_584626 
Protein GI94311416 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.143282 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0556416 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTGT CCCGTCTCAC GTCCACTGCC ATGGCCGCCG TGCTTGCCAC TGCCGGCCTC 
GCTGCCTTTA CTTCGGCCAA CGCCGAAACC ATCAAGATCG CCATTGCCGG CCCGATGAGC
GGCTCGGTCG CCCAGTACGG CGACATGGTC AAGGCTGGTG CCCTGACCGC CATCGAACAG
ATCAATGCCG CCGGCGGCGC CAACGGCAAC AAGTTCGAAG CCGTCATGAT GGACGACGCT
TGCGAACCGA AGCAGGCTGT GGCCGTGGCC AACAAGATCG TGAGCCAGGG CATCCACTAC
GTGATTGGTC ACGTGTGCTC GGGTTCGACG ATCCCGGCAT CGGATATCTA CGAGAACGAA
GGCATCGTGA TGGTCACGCC GTCGGCTACC GCGCCGCAGC TGACCGAAAC GAAGAAGCGC
AACTTCATCT TCCGTACGAT CGGCCGTGAT GACCAGCAAG GTCCCGCAGC CGCCCAGTAC
ATCATCAACA AGGTCAAGCC GAAGAAGGTT GCCGTGCTGC ACGACAAGCA GTCGTACGGC
CAGGGCATCG CCAGCTCGGT GAAGAAGGAC CTCGAAGCGG CCAAGATTCC CGTGGCGGTC
TTCGAAGGCA TCAACGCCGG CGATTCCGAC TACTCCGCTG TCATCACCAA GCTGAAGTCG
CAAGGCGTGG ACTTCGTCTA TTTCGGTGGC TATCACCCGG AAATGGGCCT GCTGCTGCGC
CAGGCGCGTG AGCAGGGCGT CAAGGCGACC TTCATGGGTC CCGAGGGCGT TGGCAACAAG
GACGTGACGG CCATCGCCGG TCCGGCATCG GAAGGCATGC TGGTGACGCT GCCGGCCGAC
TTCTCGGCCG ATCCGGCCAA CGCGGCCCTG GTGAAGGCTT TCGCCGACAA GAAGCGTGAC
CCGAACGGTC CGTTCCAGAT GCCTGCGTAC GCCGCCGTGA AGATCATTGG CGATGCCATC
ACGGGCGCCA AGAGCACGGA CCCGACGAAG GTTGCCGCTT ACATGCACAA GAACGCGTTC
AACACGCCGA TCGGCAAGGT TGAATATGAC GCGAAGGGCG ACCTGAAGTC GTTCAAGTTC
GTCGTCTACA CGTGGCACAA GGACGCCACG AAGACCGCCG CCAACTAA
 
Protein sequence
MTLSRLTSTA MAAVLATAGL AAFTSANAET IKIAIAGPMS GSVAQYGDMV KAGALTAIEQ 
INAAGGANGN KFEAVMMDDA CEPKQAVAVA NKIVSQGIHY VIGHVCSGST IPASDIYENE
GIVMVTPSAT APQLTETKKR NFIFRTIGRD DQQGPAAAQY IINKVKPKKV AVLHDKQSYG
QGIASSVKKD LEAAKIPVAV FEGINAGDSD YSAVITKLKS QGVDFVYFGG YHPEMGLLLR
QAREQGVKAT FMGPEGVGNK DVTAIAGPAS EGMLVTLPAD FSADPANAAL VKAFADKKRD
PNGPFQMPAY AAVKIIGDAI TGAKSTDPTK VAAYMHKNAF NTPIGKVEYD AKGDLKSFKF
VVYTWHKDAT KTAAN