| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2472 |
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| Symbol | |
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| ID | 4039295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2685804 |
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| End bp | 2686871 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637977871 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_584618 |
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| Protein GI | 94311408 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.278486 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.454857 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTG CAGTTCTGCC GGGCGATGGC ATCGGCCCCG AGATCGTTGC TGAAGCCGTC
AAGGTGCTCA ACGCACTGGA CGAGAAATTC GAGATGGAAA CCGCGCCGGT CGGCGGCGCT
GGCTACGAGG CCGAAGGCCA TCCGCTGCCA GACAACACGC TGAAGCTGGC CAAGGAAGCC
GACGCCATCC TGTTTGGCGC CGTGGGCGAC TGGAAGTACG ACAGCCTGGA TCGCCCGCTG
CGTCCCGAGC AGGCCATTCT CGGCCTGCGC AAGCATCTGC AGCTGTTCGC CAACTTCCGT
CCGGCTATTT GCTACCCGGA ATTGACCGGC GCATCGAGCC TGAAGCCCGA ACTGGTGGCT
GGCCTGGATA TCCTGATCGT GCGCGAGCTG AACGGCGACA TCTACTTCGG CCAGCCGCGC
GGCGTGCGCG AGGCGCCGGA TGGCCTGTTC AAGGGTGCCC GCGAAGGCTT CGACACGATG
CGCTACAGCG AGCCGGAAGT CCGCCGCATC GCGCATGTGG CGTTCCAGGC CGCTGCAAAG
CGCGGCAAGA AGCTGTGCAG CGTCGATAAG GCCAACGTGC TCGAGACTTT CCAGTTCTGG
AAAGACATCG TGATCGACGT CAGCAAGGAG TACCCGGACG TCGAGCTGTC GCACATGTAC
GTGGACAACG CCGCGATGCA GCTGGTCAAG GCGCCGAAGA GCTTCGACGT GATCGTCACC
GGCAACATGT TCGGTGACAT CCTGTCCGAC GAGGCTGCGA TGCTGACCGG TTCGATCGGC
ATGCTGCCGT CGGCGTCGCT CGATGCCAAC AACAAGGGTC TGTATGAGCC GTCGCACGGC
TCGGCGCCTG ACATCGCCGG CAAGGGCGTG GCGAATCCGC TGGCCACGAT CCTCTCCGCC
GCGATGATGC TGCGCTATTC GCTGAACCGC GCCGAACAGG CTGACCGCAT CGAGAACGCT
GTCAAGAAGG TGCTGGCCCA AGGCTATCGC ACGGCTGACA TCGTGACGCC GGGCTGCAAG
CAGGTTGGCA CGCGCGAGAT GGGCGAGGCG GTGCTGGCGG CACTGTAA
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| Protein sequence | MKIAVLPGDG IGPEIVAEAV KVLNALDEKF EMETAPVGGA GYEAEGHPLP DNTLKLAKEA
DAILFGAVGD WKYDSLDRPL RPEQAILGLR KHLQLFANFR PAICYPELTG ASSLKPELVA
GLDILIVREL NGDIYFGQPR GVREAPDGLF KGAREGFDTM RYSEPEVRRI AHVAFQAAAK
RGKKLCSVDK ANVLETFQFW KDIVIDVSKE YPDVELSHMY VDNAAMQLVK APKSFDVIVT
GNMFGDILSD EAAMLTGSIG MLPSASLDAN NKGLYEPSHG SAPDIAGKGV ANPLATILSA
AMMLRYSLNR AEQADRIENA VKKVLAQGYR TADIVTPGCK QVGTREMGEA VLAAL
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