| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2465 |
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| Symbol | trpA |
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| ID | 4039288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2676407 |
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| End bp | 2677204 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637977864 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_584611 |
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| Protein GI | 94311401 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.231435 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGTA TCCAGAAGAC TTTCGCGGCA CTGGCCGCGC AGCAGAAGAA GGGCCTGATT
CCGTTCATCA CCGCCGGCGA TCCGGCTCCC GCGTTGACCG TCGACCTGAT GCACGCCCTC
GTGGCTGGCG GCGCCGACGT GATCGAGCTT GGCGTGCCGT TTTCGGACCC GATGGCCGAC
GGCCCCGTGA TTCAGCGCGC CTCCGAGCGC GCGCTGGCCC AGGGCGTTTC GCTGACGCAG
GTGCTGGCCT GGGTGACCGA GTTCCGCAAG ACGAACGCGA CCACGCCGGT AGTGCTGATG
GGCTACGCCA ACCCGATCGA GCGCATGGGT GAGGAAACCT TCGCCAAGGC GGCCAGCGCG
GCCGGCGTGG ACGGCGTGCT CGTGGTCGAC TACCCGCCCG AAGAGTGCGA GTCTTTCGCC
GCGCTGATGC GCGCGAACCA GATGGACCCG ATCTTCCTGC TGGCGCCGAC CTCGACCGAC
GACCGTATCG CCGCGGTGGC GAAGGTGGCC AGTGGCTATC TGTACTACGT GTCGCTCACG
GGCGTGACCG GCTCGGCCAC GCTCGACCTC GAGAGCGTGG CTGCGCGTCT GCCGCTGATC
AAGCAGCACG CGAACCTGCC CGTGGGCGTG GGTTTCGGTA TCCGTGATGC GCAAACCGCA
CGTGCCATCG GCAGCGTGGC CGACGCCGTG GTGATTGGCA GCCGCCTGGT GCAGTTGCTT
GAGGATGCGC CGCGCGAGAA GGCCGTGGAC TCCCTGCGTG CCTTTATCGC CGACATCCGC
CAGGCACTGG ACGCCTGA
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| Protein sequence | MSRIQKTFAA LAAQQKKGLI PFITAGDPAP ALTVDLMHAL VAGGADVIEL GVPFSDPMAD
GPVIQRASER ALAQGVSLTQ VLAWVTEFRK TNATTPVVLM GYANPIERMG EETFAKAASA
AGVDGVLVVD YPPEECESFA ALMRANQMDP IFLLAPTSTD DRIAAVAKVA SGYLYYVSLT
GVTGSATLDL ESVAARLPLI KQHANLPVGV GFGIRDAQTA RAIGSVADAV VIGSRLVQLL
EDAPREKAVD SLRAFIADIR QALDA
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