Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2460 |
Symbol | |
ID | 4039283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 2670812 |
End bp | 2672344 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637977859 |
Product | amidophosphoribosyltransferase |
Protein accession | YP_584606 |
Protein GI | 94311396 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0352966 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.628087 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCGGTA TCGTCGGTGC GGTTTCCACC AGCCCTGTCA ATCAACTCAT CTATGACAGC CTGCTGCTGT TGCAACACCG CGGACAGGAT GCAGCCGGCA TCGCCACGGC CAATGGCAGC ACCTTTCACA TGCACAAGGC CAACGGCATG GTGCGTGACG TGTTCCGCAC GCGCAACATG CGCAGCCTGC CGGGCACGTC GGGCATCGGC CAGGTGCGCT ACCCGACCGC CGGTTCCGCG TCGAGCGAGG AAGAAGCACA GCCGTTCTAT GTGAACGCGC CGTACGGCGT CATCCTCGCC CACAACGGCA ACCTGACCAA CTCGGAACAG TTGCGCGAGG AAATGTTCCG TCGCGATCGC CGCCACATCA ACACGCATTC GGACTCCGAA GTGCTGCTGA ACGTGCTGGC CGACGAACTG CAACGCGCCA GCAGCGGCAA CGAACTGGAC CCGGAGACAA TCTTCAAGGC CGTCGCGGGC ATGCACCGCC GCGTCAAGGG TGCCTATGCG ATCACCGCGC AGATCGCCGG CTACGGCCTG CTGGCCGTAC GCGATCCGTT CGGCATCCGC CCGCTGTGTA TTGGCAGCGT CGACACCCCG ACCGGCAAGG AATACCTCAT CGCCTCGGAA TCCGTGGCCC TGGAAGGCAT CGGCTACCAG ATGGAGCGCG ATGTGGCGCC GGGCGAGGCG ATTTTCATCG ACCTGGACGG CTCGTTCCAC AGCAAGCAGT GCGCTGATAA TCCGGTGCTG ACGCCATGCA TCTTCGAGTA TGTCTATCTG GCCCGTCCGG ATTCGTGCAT TGACGGCGTG CCGGTCTACG ATGCCCGCCT GCGCATGGGC GACTACCTGG CCGAAAAGAT CCGCCGCGAA GTGCCGGCTG GCGATATTGA CGTGGTCATG CCGATTCCCG ATTCGAGCCG CCCGGCCGCC ATGCAGGTGG CCAATGCGCT CGGCGTGCAG TACCGCGAGG GCTTCTTCAA GAACCGCTAC GTGGGCCGTA CGTTCATCAT GCCGGGCCAG GCAGTGCGCA AGAAGTCGGT GCGCCAGAAG CTCAATGCGA TGGGTGTCGA GTTCAAGGGC AAGAACGTGC TGATCGTCGA CGATTCGATC GTCCGTGGTA CCACGTCGCT CGAGATCGTG CAGATGGCGC GTGACGCAGG TGCGAAGAAG GTGATCTTCG CGTCGGCAGC GCCGCCGGTG AAGTTCCCGA ACGTCTACGG TATCGACATG CCCACGCGTG CCGAACTGGT GGCCTATGGT CGCACGGACG AAGAAGTGGC GCGCATGATC GGCGCCGACC AGCTCGTCTA CCAGGACGTG GAAGCGATGA AGCAGGCTGT GCGCGACATC AACCCGAACC TGCGTGACTT TGATGCGTCG TGCTTCGACG GCAAGTACGT TACCGGCGAT ATCGACGACG CCTATCTGGA GCGCCTCGAG ACCGCGCGTA GCCTGGCCGA TCGTGAAGGC ACCAACGGCG GTGAAACCGA ACGTTCGCAG CTGCATCTGC AGCGCTCGGG CGGCAACGAA TAA
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Protein sequence | MCGIVGAVST SPVNQLIYDS LLLLQHRGQD AAGIATANGS TFHMHKANGM VRDVFRTRNM RSLPGTSGIG QVRYPTAGSA SSEEEAQPFY VNAPYGVILA HNGNLTNSEQ LREEMFRRDR RHINTHSDSE VLLNVLADEL QRASSGNELD PETIFKAVAG MHRRVKGAYA ITAQIAGYGL LAVRDPFGIR PLCIGSVDTP TGKEYLIASE SVALEGIGYQ MERDVAPGEA IFIDLDGSFH SKQCADNPVL TPCIFEYVYL ARPDSCIDGV PVYDARLRMG DYLAEKIRRE VPAGDIDVVM PIPDSSRPAA MQVANALGVQ YREGFFKNRY VGRTFIMPGQ AVRKKSVRQK LNAMGVEFKG KNVLIVDDSI VRGTTSLEIV QMARDAGAKK VIFASAAPPV KFPNVYGIDM PTRAELVAYG RTDEEVARMI GADQLVYQDV EAMKQAVRDI NPNLRDFDAS CFDGKYVTGD IDDAYLERLE TARSLADREG TNGGETERSQ LHLQRSGGNE
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