| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2439 |
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| Symbol | |
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| ID | 4039261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2646911 |
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| End bp | 2647927 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637977837 |
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| Product | ribosomal large subunit pseudouridine synthase C |
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| Protein accession | YP_584585 |
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| Protein GI | 94311375 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.122309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAATGA ATGAGTTACG CCATCAAATT GCAACGGAGC CGCAATCGCG CCCCAGCGGG
CTCCAAGTGG CGTACGTGAC AGTCGACGAA AGTTCGGAAG GGCAGCGCAT CGACAACTTC
CTGTTGAAGG TGGCCAAGGG CGTGCCCAAA AGCCACATTT ATCGCGTGTT GCGCTCGGGC
GAAGTGCGCG TCAACAAAGG TCGGGTCGAC GCCACTTATC GGCTGCAGAA CGGGGATGTG
GTGCGTATCC CGCCGATGCG CGTGGCGGAG AAGGCTGCCC CGACCGGTGG TTTCGTGCCC
GCCGGCGAGT TTCCTGTGCT TTTTGAGGAT GCCGCGCTGC TCGTGATCGA CAAGCCGGCC
GGCGTGGCCG TGCATGGCGG GTCTGGGGTG GCCTTCGGTG TGATCGAACA GCTACGCCGC
GCCAGGCCGG AGGCGAAGTT CCTCGAGCTG GTCCACCGGC TCGATCGGGA AACGTCCGGA
ATTTTGGTGC TGGCGAAGAA GCGTTCCGTG CTGGTGCACC TGCACGAGCA GATTCGTGGC
AACGGCATGG ACAAGCGGTA TTTCGCCTGC GTGGCGGGCG AGTTTCCGAA CACGCGCCAG
CATGTGAAGC TACCTCTATA TAAATACAGC ACGCCGGACG GCGAACGCCG CGTGCGTGTG
CAGGCGGACG GGTTGGCGTC ACATACGGTC TTCAATCGCA TGGAGGCCTT CGATGGCTAC
ACGTTGCTGG AGGCCGAACT GAAGACCGGG CGGACGCACC AGATTCGCGT GCATCTGCAA
TCGATTGGCT TCCCGATCGT TGGTGATGAT AAATATGGCG ATTTTGCGCT CAATAAGGCG
CTTTCTCGCA GCGGCACCAA GCCGGGGCTG AAACGCATGT TCCTGCATGC GCACCGGCTC
ACGCTGACAC ATCCGGTCAC CGGCGCGCCG ATGACAGTGT CCGCGCCATT GCCTGCCGAG
TGTGTTGAAT TTCTGCAACA ATTGCGGCAA GGGCGACCAG CGCGCGACGC GGACTGA
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| Protein sequence | MKMNELRHQI ATEPQSRPSG LQVAYVTVDE SSEGQRIDNF LLKVAKGVPK SHIYRVLRSG
EVRVNKGRVD ATYRLQNGDV VRIPPMRVAE KAAPTGGFVP AGEFPVLFED AALLVIDKPA
GVAVHGGSGV AFGVIEQLRR ARPEAKFLEL VHRLDRETSG ILVLAKKRSV LVHLHEQIRG
NGMDKRYFAC VAGEFPNTRQ HVKLPLYKYS TPDGERRVRV QADGLASHTV FNRMEAFDGY
TLLEAELKTG RTHQIRVHLQ SIGFPIVGDD KYGDFALNKA LSRSGTKPGL KRMFLHAHRL
TLTHPVTGAP MTVSAPLPAE CVEFLQQLRQ GRPARDAD
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