Gene Rmet_2429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2429 
Symbol 
ID4039251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2638797 
End bp2639732 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content66% 
IMG OID637977827 
Product[Acyl-carrier-protein] S-malonyltransferase 
Protein accessionYP_584575 
Protein GI94311365 
COG category[I] Lipid transport and metabolism 
COG ID[COG0331] (acyl-carrier-protein) S-malonyltransferase 
TIGRFAM ID[TIGR00128] malonyl CoA-acyl carrier protein transacylase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.952557 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCG CATTTGTTTT CCCCGGACAG GGTTCGCAGT CGGTCGGCAT GCTCAATGCC 
TTTGCCGATA ACCCAGTGGT GCGTGCCACG CTTGAAGAAG CTTCGACGGC GCTGGGTCAG
GACATCGGCA AGCTGATTGC GGAAGGTCCG GCCGAAGAGC TGAACCTGAC GACCAACACG
CAGCCCGTGA TGCTGACGGC CGCAGTGGCC GTGTACCGCG CATGGCTCGA CGCCGGTGGT
CCGGCTCCGG CGCTGGTTGC AGGCCATAGC CTGGGCGAGT ACTCGGCGCT GGTGGCCGCA
GGGGTGATCC CGTTTGCCGA GGCGGTGCCG CTGGTTCGCT TCCGTGCCCA GGCGATGCAG
GAAGCGGTGC CGGTGGGTGA GGGCGGCATG GCCGCGATCC TTGGCCTGTC GGACGATGAC
GTGCGCGCCG CGTGCGCCGA GGCTGCGGCG GCAGGCGCTG GCGTGGTCGA GGCTGTCAAC
TTCAATGCCC CGTCGCAGGT GGTGATCGCC GGCAACAAGG GCGCCGTGGA AAAGGCCTGC
GAGATTGCCA AGGCGAAGGG CGCCAAGCGC GCGCTGCCGC TGCCGGTGTC CGCCCCGTTC
CACTCGTCGC TGCTCAAGCC TGCCTCCGAT CGCCTGCGCG AGCGCATGGC TGGCCTGTCG
TTCTCGGCAC CGGCCATTCC GCTGGTGAAC AATGTCGACG TGGCAATCAT CAGTGACCCG
GCTCAGATCA AGGACGCGCT TGTTCGTCAG GCAGCCGCTC CGGTACGCTG GGTCGAGTGC
GTGCAGAAGA TTGCCGCCGA GGGCGTGACA CACGTGATCG AGTGCGGTCC GGGTAAAGTG
CTGGCCGGTA TGACCAAGCG CATCGACGGC AACCTCGTTG GTGGTGCAAT CTTTGATCCG
GCGTCGCTGC AGGAAACGCT GGCGCTGCTG AAGTAA
 
Protein sequence
MKFAFVFPGQ GSQSVGMLNA FADNPVVRAT LEEASTALGQ DIGKLIAEGP AEELNLTTNT 
QPVMLTAAVA VYRAWLDAGG PAPALVAGHS LGEYSALVAA GVIPFAEAVP LVRFRAQAMQ
EAVPVGEGGM AAILGLSDDD VRAACAEAAA AGAGVVEAVN FNAPSQVVIA GNKGAVEKAC
EIAKAKGAKR ALPLPVSAPF HSSLLKPASD RLRERMAGLS FSAPAIPLVN NVDVAIISDP
AQIKDALVRQ AAAPVRWVEC VQKIAAEGVT HVIECGPGKV LAGMTKRIDG NLVGGAIFDP
ASLQETLALL K