| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2425 |
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| Symbol | |
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| ID | 4039247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2635319 |
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| End bp | 2635918 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637977823 |
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| Product | RNA polymerase sigma factor RpoE |
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| Protein accession | YP_584571 |
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| Protein GI | 94311361 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02939] RNA polymerase sigma factor RpoE |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0205284 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.871002 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGTGAAC GCGAAGCCGA TCAGCTTCTA GTTGAACGCG TCCAGCAGGG CGACAAACGG
GCCTTTGAGT TGCTGGTGAC CAAATATCAC CGCAAGATCA TCCGCCTGAT CTCCCGCCTT
GTCCGAGACC CCGCCGAAGT GGAGGATGTG GCGCAAGATG CCTTTATCAA GGCATATCGC
GCGCTGCCCC AGTTCCGGGG CGAATCCGCT TTCTACACGT GGCTGTACCG GATCGCCGTC
AACACGGCCA AGAACTACCT GGCCACCCAG GGACGGCGGC CGGAAGCGTC CAGCGATATC
GATGCCGAAG AGGCTGAAAC TTTTGCGGAC GGTGAGCAAC TAAGGGATAT CAATACGCCG
GAGTCGATGC TCCACACGCG CCAGGTTGCC GATACGGTGA ACCGCGCCAT GGAGGCATTG
CCGGAAGAAT TACGCACCGC CATTACGCTG CGCGAGATCG AAGGCCTCAG CTATGAGGAG
ATCGCGGAGG CGATGGGGTG TCCGATCGGT ACGGTGCGCT CGCGGATTTT CCGGGCGCGC
GAAGCGATCG CCGAGAAGTT GCGCCCGCTG CTGGGAACGG CAGAGGGCAA GCGGTGGTAG
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| Protein sequence | MSEREADQLL VERVQQGDKR AFELLVTKYH RKIIRLISRL VRDPAEVEDV AQDAFIKAYR
ALPQFRGESA FYTWLYRIAV NTAKNYLATQ GRRPEASSDI DAEEAETFAD GEQLRDINTP
ESMLHTRQVA DTVNRAMEAL PEELRTAITL REIEGLSYEE IAEAMGCPIG TVRSRIFRAR
EAIAEKLRPL LGTAEGKRW
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