Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2409 |
Symbol | |
ID | 4039231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 2618628 |
End bp | 2619227 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637977807 |
Product | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
Protein accession | YP_584555 |
Protein GI | 94311345 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0558] Phosphatidylglycerophosphate synthase |
TIGRFAM ID | [TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0217155 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000336291 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCACTTA ACATTCCCAT TCTGCTGACC TGGCTTCGCG TGGCCATGAT CCCGCTGGTC GTCGGGGTTT ATTACCTGCC CGAGGCCTGG CTGCCGATGC ACACCAAGAA CGTCACCGCG GCATCGTTCT TCGTCATCGC GGCAGTGACG GATTGGCTCG ATGGCTTTCT GGCGCGGCGC TGGAATCAGA CCTCGGCCTT CGGTGCCTTC CTCGATCCGG TGGCCGACAA GCTTATGGTG ACAGCCGCAT TGCTGTCGTT GCTGGCGCTG GGGCGGGTGG CCGACCTGAT CGCGCTGATC ATCATCGGGC GTGAGATCAC GATTTCGGCA CTGCGCGAAT GGATGGCCCA GATCGGCGCT TCGAAGAGCG TAGCGGTAAA TTTCCTTGGT AAGCTGAAGA CCACCGTGCA GATGATCGCG ATCCCGTTGC TGCTGTTCAA CGACGCGCTG TTCGGTGTGG ACGCATCGCT GCTTGGTGGC TGGATGATCT ACCTGGCGGC CGTGCTCACG TTGTGGTCGA TGTTCTATTA CATGAAGCTC GCCTGGCCGC AGATTCGCGA GCGCAGCGAG GTCATCAGCG GGGCTCGGAC ACAAAAGTGA
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Protein sequence | MPLNIPILLT WLRVAMIPLV VGVYYLPEAW LPMHTKNVTA ASFFVIAAVT DWLDGFLARR WNQTSAFGAF LDPVADKLMV TAALLSLLAL GRVADLIALI IIGREITISA LREWMAQIGA SKSVAVNFLG KLKTTVQMIA IPLLLFNDAL FGVDASLLGG WMIYLAAVLT LWSMFYYMKL AWPQIRERSE VISGARTQK
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