| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2278 |
|---|
| Symbol | |
|---|
| ID | 4039097 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 2501526 |
|---|
| End bp | 2502257 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637977674 |
|---|
| Product | MotA/TolQ/ExbB proton channel |
|---|
| Protein accession | YP_584426 |
|---|
| Protein GI | 94311216 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0811] Biopolymer transport proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.314419 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0287229 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGACC TCGGACTTTC CCACCTCTGG TCGCAAGGCG ATTTCGTCAT GCGCGCGACC
GCCATCATTC TGCTGATCAT GTCGCTCCTG TCGTGGATCG TGATCCTCAC CAAGGCGTGG
GATCTGATCC GCCTCAAGAA GATGGCGCAC GGCGCGGAAA AGCGCTTCTG GCATTCCGAC
GATTTCGACC ACGCGCTCGA CACGCTCGGC GCCAACGATG CCAACCCGTT CCGCATGCTG
GCCGTCACCG GCCGTGAGGC GGCTCAGCAT CACCGCGCCA GCCAGCCGCA ATTGCATGAC
GCACTCGACA TCTCGGACTG GCTGACCCGT TCGCTCAAGA GTGCGATCGA CGAAGCCGTG
GCGCGAATGC AATCAGGTCT GGCCATTCTG GCGTCGGTGG GTTCGACGGC CCCGTTCGTC
GGCCTGTTCG GCACCGTGTG GGGCATCTAC CACGCGCTGA TCGGCATTGG CGCCTCCGGC
GTGCCGACGA TCGACAAGGT TGCCGGCCCG GTGGGCGAAG CGCTGATCAT GACCGCCTTC
GGCCTGGCCG TGGCGATCCC GGCCGTGCTC GGCTACAACG CGCTGAGCCG CGGCAACAAG
GGCGTCATCA GCAAGTTGAA CCGCTTCGCG CACGACCTGC ACGCCTATTT CGTGACCGGC
GCCCGTGTGC GCCCGACCAC TGGTGGCGTC CGCGCCGATG ACGCGTCGGT CCGCCTGGCC
GTCAAGAACT AA
|
|---|
| Protein sequence | MQDLGLSHLW SQGDFVMRAT AIILLIMSLL SWIVILTKAW DLIRLKKMAH GAEKRFWHSD
DFDHALDTLG ANDANPFRML AVTGREAAQH HRASQPQLHD ALDISDWLTR SLKSAIDEAV
ARMQSGLAIL ASVGSTAPFV GLFGTVWGIY HALIGIGASG VPTIDKVAGP VGEALIMTAF
GLAVAIPAVL GYNALSRGNK GVISKLNRFA HDLHAYFVTG ARVRPTTGGV RADDASVRLA
VKN
|
|---|
| |